Gene : Bostr.3359s0048 B. stricta v1.2
Defline:  (1 of 1) PTHR21433//PTHR21433:SF4 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA Genomic Order:  48
Name:  ? Bostr.3359s0048 Secondary Identifier:  ? PAC:30655198
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3359s0048 0.5kb upstream 0.5kb upstream 3892 true Scaffold3359: 464496-468387 Boechera stricta
Bostr.3359s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 467888-468387 Boechera stricta
Bostr.3359s0048 0.5kb downstream 0.5kb downstream 3892 true Scaffold3359: 463996-467887 Boechera stricta
Bostr.3359s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 463996-464495 Boechera stricta
Bostr.3359s0048 1.0kb upstream 1.0kb upstream 4392 true Scaffold3359: 464496-468887 Boechera stricta
Bostr.3359s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 467888-468887 Boechera stricta
Bostr.3359s0048 1.0kb downstream 1.0kb downstream 4392 true Scaffold3359: 463496-467887 Boechera stricta
Bostr.3359s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 463496-464495 Boechera stricta
Bostr.3359s0048 2.0kb upstream 2.0kb upstream 5392 true Scaffold3359: 464496-469887 Boechera stricta
Bostr.3359s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 467888-469887 Boechera stricta
Bostr.3359s0048 2.0kb downstream 2.0kb downstream 5392 true Scaffold3359: 462496-467887 Boechera stricta
Bostr.3359s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 462496-464495 Boechera stricta
Bostr.3359s0048 5.0kb upstream 5.0kb upstream 8392 true Scaffold3359: 464496-472887 Boechera stricta
Bostr.3359s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 467888-472887 Boechera stricta
Bostr.3359s0048 5.0kb downstream 5.0kb downstream 8392 true Scaffold3359: 459496-467887 Boechera stricta
Bostr.3359s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 459496-464495 Boechera stricta
Bostr.3359s0048 10.0kb upstream 10.0kb upstream 13392 true Scaffold3359: 464496-477887 Boechera stricta
Bostr.3359s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 467888-477887 Boechera stricta
Bostr.3359s0048 10.0kb downstream 10.0kb downstream 13392 true Scaffold3359: 454496-467887 Boechera stricta
Bostr.3359s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 454496-464495 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361948 5261 Brassicaceae View MSA
123837614 5264 Brassicales-Malvales View MSA
124337122 5266 SBM View MSA
124251175 5268 Malvidae View MSA
124065114 5270 Rosid View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain