Gene : Bostr.3288s0124 B. stricta v1.2

Defline:  (1 of 2) 1.1.99.35 - Soluble quinoprotein glucose dehydrogenase / Soluble glucose dehydrogenase Genomic Order:  124
Name:  ? Bostr.3288s0124 Secondary Identifier:  ? PAC:30675481

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUCOSE1PMETAB-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0124 0.5kb upstream 0.5kb upstream 3802 true Scaffold3288: 617821-621622 Boechera stricta
Bostr.3288s0124 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 617821-618320 Boechera stricta
Bostr.3288s0124 0.5kb downstream 0.5kb downstream 3802 true Scaffold3288: 618321-622122 Boechera stricta
Bostr.3288s0124 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 621623-622122 Boechera stricta
Bostr.3288s0124 1.0kb upstream 1.0kb upstream 4302 true Scaffold3288: 617321-621622 Boechera stricta
Bostr.3288s0124 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 617321-618320 Boechera stricta
Bostr.3288s0124 1.0kb downstream 1.0kb downstream 4302 true Scaffold3288: 618321-622622 Boechera stricta
Bostr.3288s0124 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 621623-622622 Boechera stricta
Bostr.3288s0124 2.0kb upstream 2.0kb upstream 5302 true Scaffold3288: 616321-621622 Boechera stricta
Bostr.3288s0124 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 616321-618320 Boechera stricta
Bostr.3288s0124 2.0kb downstream 2.0kb downstream 5302 true Scaffold3288: 618321-623622 Boechera stricta
Bostr.3288s0124 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 621623-623622 Boechera stricta
Bostr.3288s0124 5.0kb upstream 5.0kb upstream 8302 true Scaffold3288: 613321-621622 Boechera stricta
Bostr.3288s0124 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 613321-618320 Boechera stricta
Bostr.3288s0124 5.0kb downstream 5.0kb downstream 8302 true Scaffold3288: 618321-626622 Boechera stricta
Bostr.3288s0124 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 621623-626622 Boechera stricta
Bostr.3288s0124 10.0kb upstream 10.0kb upstream 13302 true Scaffold3288: 608321-621622 Boechera stricta
Bostr.3288s0124 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 608321-618320 Boechera stricta
Bostr.3288s0124 10.0kb downstream 10.0kb downstream 13302 true Scaffold3288: 618321-631622 Boechera stricta
Bostr.3288s0124 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 621623-631622 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373045 5261 Brassicaceae View MSA
123834860 5264 Brassicales-Malvales View MSA
124342822 5266 SBM View MSA
124245672 5268 Malvidae View MSA
124061288 5270 Rosid View MSA
123749936 5271 Pentapetalae View MSA
122794140 5272 Eudicot View MSA
122045052 5273 Angiosperm View MSA
121344764 5274 Embryophyte View MSA
123380098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain