Gene : Bostr.3288s0118 B. stricta v1.2

Defline:  (1 of 1) PTHR10024:SF201 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  118
Name:  ? Bostr.3288s0118 Secondary Identifier:  ? PAC:30675502

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0118 0.5kb upstream 0.5kb upstream 4072 true Scaffold3288: 573740-577811 Boechera stricta
Bostr.3288s0118 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 573740-574239 Boechera stricta
Bostr.3288s0118 0.5kb downstream 0.5kb downstream 4072 true Scaffold3288: 574240-578311 Boechera stricta
Bostr.3288s0118 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 577812-578311 Boechera stricta
Bostr.3288s0118 1.0kb upstream 1.0kb upstream 4572 true Scaffold3288: 573240-577811 Boechera stricta
Bostr.3288s0118 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 573240-574239 Boechera stricta
Bostr.3288s0118 1.0kb downstream 1.0kb downstream 4572 true Scaffold3288: 574240-578811 Boechera stricta
Bostr.3288s0118 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 577812-578811 Boechera stricta
Bostr.3288s0118 2.0kb upstream 2.0kb upstream 5572 true Scaffold3288: 572240-577811 Boechera stricta
Bostr.3288s0118 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 572240-574239 Boechera stricta
Bostr.3288s0118 2.0kb downstream 2.0kb downstream 5572 true Scaffold3288: 574240-579811 Boechera stricta
Bostr.3288s0118 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 577812-579811 Boechera stricta
Bostr.3288s0118 5.0kb upstream 5.0kb upstream 8572 true Scaffold3288: 569240-577811 Boechera stricta
Bostr.3288s0118 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 569240-574239 Boechera stricta
Bostr.3288s0118 5.0kb downstream 5.0kb downstream 8572 true Scaffold3288: 574240-582811 Boechera stricta
Bostr.3288s0118 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 577812-582811 Boechera stricta
Bostr.3288s0118 10.0kb upstream 10.0kb upstream 13572 true Scaffold3288: 564240-577811 Boechera stricta
Bostr.3288s0118 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 564240-574239 Boechera stricta
Bostr.3288s0118 10.0kb downstream 10.0kb downstream 13572 true Scaffold3288: 574240-587811 Boechera stricta
Bostr.3288s0118 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 577812-587811 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368133 5261 Brassicaceae View MSA
123837896 5264 Brassicales-Malvales View MSA
124336795 5266 SBM View MSA
124238507 5268 Malvidae View MSA
124065357 5270 Rosid View MSA
123748968 5271 Pentapetalae View MSA
122790054 5272 Eudicot View MSA
122049348 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain