Gene : Bostr.3288s0149 B. stricta v1.2

Defline:  (1 of 1) PTHR23084:SF119 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 Genomic Order:  149
Name:  ? Bostr.3288s0149 Secondary Identifier:  ? PAC:30675423

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0149 0.5kb upstream 0.5kb upstream 6064 true Scaffold3288: 716690-722753 Boechera stricta
Bostr.3288s0149 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 722254-722753 Boechera stricta
Bostr.3288s0149 0.5kb downstream 0.5kb downstream 6064 true Scaffold3288: 716190-722253 Boechera stricta
Bostr.3288s0149 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 716190-716689 Boechera stricta
Bostr.3288s0149 1.0kb upstream 1.0kb upstream 6564 true Scaffold3288: 716690-723253 Boechera stricta
Bostr.3288s0149 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 722254-723253 Boechera stricta
Bostr.3288s0149 1.0kb downstream 1.0kb downstream 6564 true Scaffold3288: 715690-722253 Boechera stricta
Bostr.3288s0149 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 715690-716689 Boechera stricta
Bostr.3288s0149 2.0kb upstream 2.0kb upstream 7564 true Scaffold3288: 716690-724253 Boechera stricta
Bostr.3288s0149 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 722254-724253 Boechera stricta
Bostr.3288s0149 2.0kb downstream 2.0kb downstream 7564 true Scaffold3288: 714690-722253 Boechera stricta
Bostr.3288s0149 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 714690-716689 Boechera stricta
Bostr.3288s0149 5.0kb upstream 5.0kb upstream 10564 true Scaffold3288: 716690-727253 Boechera stricta
Bostr.3288s0149 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 722254-727253 Boechera stricta
Bostr.3288s0149 5.0kb downstream 5.0kb downstream 10564 true Scaffold3288: 711690-722253 Boechera stricta
Bostr.3288s0149 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 711690-716689 Boechera stricta
Bostr.3288s0149 10.0kb upstream 10.0kb upstream 15564 true Scaffold3288: 716690-732253 Boechera stricta
Bostr.3288s0149 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 722254-732253 Boechera stricta
Bostr.3288s0149 10.0kb downstream 10.0kb downstream 15564 true Scaffold3288: 706690-722253 Boechera stricta
Bostr.3288s0149 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 706690-716689 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370447 5261 Brassicaceae View MSA
123834300 5264 Brassicales-Malvales View MSA
124343799 5266 SBM View MSA
124240797 5268 Malvidae View MSA
124066570 5270 Rosid View MSA
123740102 5271 Pentapetalae View MSA
122787208 5272 Eudicot View MSA
122045531 5273 Angiosperm View MSA
121346964 5274 Embryophyte View MSA
123427675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain