Gene : Bostr.3288s0045 B. stricta v1.2
Defline:  (1 of 2) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  45
Name:  ? Bostr.3288s0045 Secondary Identifier:  ? PAC:30675503
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7193 Boechera stricta pathologic  
Bstricta PWY-7196 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0045 0.5kb upstream 0.5kb upstream 4162 true Scaffold3288: 216961-221122 Boechera stricta
Bostr.3288s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 220623-221122 Boechera stricta
Bostr.3288s0045 0.5kb downstream 0.5kb downstream 4162 true Scaffold3288: 216461-220622 Boechera stricta
Bostr.3288s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 216461-216960 Boechera stricta
Bostr.3288s0045 1.0kb upstream 1.0kb upstream 4662 true Scaffold3288: 216961-221622 Boechera stricta
Bostr.3288s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 220623-221622 Boechera stricta
Bostr.3288s0045 1.0kb downstream 1.0kb downstream 4662 true Scaffold3288: 215961-220622 Boechera stricta
Bostr.3288s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 215961-216960 Boechera stricta
Bostr.3288s0045 2.0kb upstream 2.0kb upstream 5662 true Scaffold3288: 216961-222622 Boechera stricta
Bostr.3288s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 220623-222622 Boechera stricta
Bostr.3288s0045 2.0kb downstream 2.0kb downstream 5662 true Scaffold3288: 214961-220622 Boechera stricta
Bostr.3288s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 214961-216960 Boechera stricta
Bostr.3288s0045 5.0kb upstream 5.0kb upstream 8662 true Scaffold3288: 216961-225622 Boechera stricta
Bostr.3288s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 220623-225622 Boechera stricta
Bostr.3288s0045 5.0kb downstream 5.0kb downstream 8662 true Scaffold3288: 211961-220622 Boechera stricta
Bostr.3288s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 211961-216960 Boechera stricta
Bostr.3288s0045 10.0kb upstream 10.0kb upstream 13662 true Scaffold3288: 216961-230622 Boechera stricta
Bostr.3288s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 220623-230622 Boechera stricta
Bostr.3288s0045 10.0kb downstream 10.0kb downstream 13662 true Scaffold3288: 206961-220622 Boechera stricta
Bostr.3288s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 206961-216960 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367014 5261 Brassicaceae View MSA
123830344 5264 Brassicales-Malvales View MSA
124341363 5266 SBM View MSA
124243997 5268 Malvidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain