Gene : Bostr.3288s0077 B. stricta v1.2
Defline:  (1 of 1) PTHR22603:SF41 - CHOLINE KINASE 2-RELATED Genomic Order:  77
Name:  ? Bostr.3288s0077 Secondary Identifier:  ? PAC:30675415
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3385 Boechera stricta pathologic  
Bstricta PWY4FS-6 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0077 0.5kb upstream 0.5kb upstream 2969 true Scaffold3288: 372539-375507 Boechera stricta
Bostr.3288s0077 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 372539-373038 Boechera stricta
Bostr.3288s0077 0.5kb downstream 0.5kb downstream 2969 true Scaffold3288: 373039-376007 Boechera stricta
Bostr.3288s0077 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 375508-376007 Boechera stricta
Bostr.3288s0077 1.0kb upstream 1.0kb upstream 3469 true Scaffold3288: 372039-375507 Boechera stricta
Bostr.3288s0077 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 372039-373038 Boechera stricta
Bostr.3288s0077 1.0kb downstream 1.0kb downstream 3469 true Scaffold3288: 373039-376507 Boechera stricta
Bostr.3288s0077 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 375508-376507 Boechera stricta
Bostr.3288s0077 2.0kb upstream 2.0kb upstream 4469 true Scaffold3288: 371039-375507 Boechera stricta
Bostr.3288s0077 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 371039-373038 Boechera stricta
Bostr.3288s0077 2.0kb downstream 2.0kb downstream 4469 true Scaffold3288: 373039-377507 Boechera stricta
Bostr.3288s0077 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 375508-377507 Boechera stricta
Bostr.3288s0077 5.0kb upstream 5.0kb upstream 7469 true Scaffold3288: 368039-375507 Boechera stricta
Bostr.3288s0077 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 368039-373038 Boechera stricta
Bostr.3288s0077 5.0kb downstream 5.0kb downstream 7469 true Scaffold3288: 373039-380507 Boechera stricta
Bostr.3288s0077 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 375508-380507 Boechera stricta
Bostr.3288s0077 10.0kb upstream 10.0kb upstream 12469 true Scaffold3288: 363039-375507 Boechera stricta
Bostr.3288s0077 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 363039-373038 Boechera stricta
Bostr.3288s0077 10.0kb downstream 10.0kb downstream 12469 true Scaffold3288: 373039-385507 Boechera stricta
Bostr.3288s0077 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 375508-385507 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373896 5261 Brassicaceae View MSA
123830866 5264 Brassicales-Malvales View MSA
124346062 5266 SBM View MSA
124248672 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain