Gene : Bostr.3288s0079 B. stricta v1.2
Defline:  (1 of 1) PTHR15039:SF11 - DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN Genomic Order:  79
Name:  ? Bostr.3288s0079 Secondary Identifier:  ? PAC:30675471
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0079 0.5kb upstream 0.5kb upstream 4225 true Scaffold3288: 380999-385223 Boechera stricta
Bostr.3288s0079 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 384724-385223 Boechera stricta
Bostr.3288s0079 0.5kb downstream 0.5kb downstream 4225 true Scaffold3288: 380499-384723 Boechera stricta
Bostr.3288s0079 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 380499-380998 Boechera stricta
Bostr.3288s0079 1.0kb upstream 1.0kb upstream 4725 true Scaffold3288: 380999-385723 Boechera stricta
Bostr.3288s0079 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 384724-385723 Boechera stricta
Bostr.3288s0079 1.0kb downstream 1.0kb downstream 4725 true Scaffold3288: 379999-384723 Boechera stricta
Bostr.3288s0079 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 379999-380998 Boechera stricta
Bostr.3288s0079 2.0kb upstream 2.0kb upstream 5725 true Scaffold3288: 380999-386723 Boechera stricta
Bostr.3288s0079 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 384724-386723 Boechera stricta
Bostr.3288s0079 2.0kb downstream 2.0kb downstream 5725 true Scaffold3288: 378999-384723 Boechera stricta
Bostr.3288s0079 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 378999-380998 Boechera stricta
Bostr.3288s0079 5.0kb upstream 5.0kb upstream 8725 true Scaffold3288: 380999-389723 Boechera stricta
Bostr.3288s0079 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 384724-389723 Boechera stricta
Bostr.3288s0079 5.0kb downstream 5.0kb downstream 8725 true Scaffold3288: 375999-384723 Boechera stricta
Bostr.3288s0079 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 375999-380998 Boechera stricta
Bostr.3288s0079 10.0kb upstream 10.0kb upstream 13725 true Scaffold3288: 380999-394723 Boechera stricta
Bostr.3288s0079 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 384724-394723 Boechera stricta
Bostr.3288s0079 10.0kb downstream 10.0kb downstream 13725 true Scaffold3288: 370999-384723 Boechera stricta
Bostr.3288s0079 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 370999-380998 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378968 5261 Brassicaceae View MSA
123840858 5264 Brassicales-Malvales View MSA
124347003 5266 SBM View MSA
124245630 5268 Malvidae View MSA
124071671 5270 Rosid View MSA
123741974 5271 Pentapetalae View MSA
122794154 5272 Eudicot View MSA
122048718 5273 Angiosperm View MSA
121349039 5274 Embryophyte View MSA
123381135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain