Gene : Bostr.3288s0083 B. stricta v1.2
Defline:  (1 of 3) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  83
Name:  ? Bostr.3288s0083 Secondary Identifier:  ? PAC:30675494
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5936 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3288s0083 0.5kb upstream 0.5kb upstream 1874 true Scaffold3288: 401171-403044 Boechera stricta
Bostr.3288s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold3288: 401171-401670 Boechera stricta
Bostr.3288s0083 0.5kb downstream 0.5kb downstream 1874 true Scaffold3288: 401671-403544 Boechera stricta
Bostr.3288s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold3288: 403045-403544 Boechera stricta
Bostr.3288s0083 1.0kb upstream 1.0kb upstream 2374 true Scaffold3288: 400671-403044 Boechera stricta
Bostr.3288s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold3288: 400671-401670 Boechera stricta
Bostr.3288s0083 1.0kb downstream 1.0kb downstream 2374 true Scaffold3288: 401671-404044 Boechera stricta
Bostr.3288s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold3288: 403045-404044 Boechera stricta
Bostr.3288s0083 2.0kb upstream 2.0kb upstream 3374 true Scaffold3288: 399671-403044 Boechera stricta
Bostr.3288s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold3288: 399671-401670 Boechera stricta
Bostr.3288s0083 2.0kb downstream 2.0kb downstream 3374 true Scaffold3288: 401671-405044 Boechera stricta
Bostr.3288s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold3288: 403045-405044 Boechera stricta
Bostr.3288s0083 5.0kb upstream 5.0kb upstream 6374 true Scaffold3288: 396671-403044 Boechera stricta
Bostr.3288s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold3288: 396671-401670 Boechera stricta
Bostr.3288s0083 5.0kb downstream 5.0kb downstream 6374 true Scaffold3288: 401671-408044 Boechera stricta
Bostr.3288s0083 5.0kb downstream 5.0kb downstream 5000 false Scaffold3288: 403045-408044 Boechera stricta
Bostr.3288s0083 10.0kb upstream 10.0kb upstream 11374 true Scaffold3288: 391671-403044 Boechera stricta
Bostr.3288s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold3288: 391671-401670 Boechera stricta
Bostr.3288s0083 10.0kb downstream 10.0kb downstream 11374 true Scaffold3288: 401671-413044 Boechera stricta
Bostr.3288s0083 10.0kb downstream 10.0kb downstream 10000 false Scaffold3288: 403045-413044 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374059 5261 Brassicaceae View MSA
123839780 5264 Brassicales-Malvales View MSA
124338371 5266 SBM View MSA
124251626 5268 Malvidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain