Gene : Bostr.3640s0093 B. stricta v1.2

Defline:  (1 of 452) PF13041 - PPR repeat family (PPR_2) Genomic Order:  93
Name:  ? Bostr.3640s0093 Secondary Identifier:  ? PAC:30651955

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3640s0093 0.5kb upstream 0.5kb upstream 1685 true Scaffold3640: 417241-418925 Boechera stricta
Bostr.3640s0093 0.5kb upstream 0.5kb upstream 500 false Scaffold3640: 418426-418925 Boechera stricta
Bostr.3640s0093 0.5kb downstream 0.5kb downstream 1685 true Scaffold3640: 416741-418425 Boechera stricta
Bostr.3640s0093 0.5kb downstream 0.5kb downstream 500 false Scaffold3640: 416741-417240 Boechera stricta
Bostr.3640s0093 1.0kb upstream 1.0kb upstream 2185 true Scaffold3640: 417241-419425 Boechera stricta
Bostr.3640s0093 1.0kb upstream 1.0kb upstream 1000 false Scaffold3640: 418426-419425 Boechera stricta
Bostr.3640s0093 1.0kb downstream 1.0kb downstream 2185 true Scaffold3640: 416241-418425 Boechera stricta
Bostr.3640s0093 1.0kb downstream 1.0kb downstream 1000 false Scaffold3640: 416241-417240 Boechera stricta
Bostr.3640s0093 2.0kb upstream 2.0kb upstream 3185 true Scaffold3640: 417241-420425 Boechera stricta
Bostr.3640s0093 2.0kb upstream 2.0kb upstream 2000 false Scaffold3640: 418426-420425 Boechera stricta
Bostr.3640s0093 2.0kb downstream 2.0kb downstream 3185 true Scaffold3640: 415241-418425 Boechera stricta
Bostr.3640s0093 2.0kb downstream 2.0kb downstream 2000 false Scaffold3640: 415241-417240 Boechera stricta
Bostr.3640s0093 5.0kb upstream 5.0kb upstream 6185 true Scaffold3640: 417241-423425 Boechera stricta
Bostr.3640s0093 5.0kb upstream 5.0kb upstream 5000 false Scaffold3640: 418426-423425 Boechera stricta
Bostr.3640s0093 5.0kb downstream 5.0kb downstream 6185 true Scaffold3640: 412241-418425 Boechera stricta
Bostr.3640s0093 5.0kb downstream 5.0kb downstream 5000 false Scaffold3640: 412241-417240 Boechera stricta
Bostr.3640s0093 10.0kb upstream 10.0kb upstream 11185 true Scaffold3640: 417241-428425 Boechera stricta
Bostr.3640s0093 10.0kb upstream 10.0kb upstream 10000 false Scaffold3640: 418426-428425 Boechera stricta
Bostr.3640s0093 10.0kb downstream 10.0kb downstream 11185 true Scaffold3640: 407241-418425 Boechera stricta
Bostr.3640s0093 10.0kb downstream 10.0kb downstream 10000 false Scaffold3640: 407241-417240 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374696 5261 Brassicaceae View MSA
123835608 5264 Brassicales-Malvales View MSA
124339441 5266 SBM View MSA
124239127 5268 Malvidae View MSA
124063725 5270 Rosid View MSA
123743446 5271 Pentapetalae View MSA
122788248 5272 Eudicot View MSA
122047755 5273 Angiosperm View MSA
121310787 5274 Embryophyte View MSA
123348188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain