Gene : Bostr.3640s0088 B. stricta v1.2
Defline:  (1 of 2) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  88
Name:  ? Bostr.3640s0088 Secondary Identifier:  ? PAC:30652026
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CYSTSYN-PWY Boechera stricta pathologic  
Bstricta PWY-6936 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3640s0088 0.5kb upstream 0.5kb upstream 1564 true Scaffold3640: 397177-398740 Boechera stricta
Bostr.3640s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold3640: 398241-398740 Boechera stricta
Bostr.3640s0088 0.5kb downstream 0.5kb downstream 1564 true Scaffold3640: 396677-398240 Boechera stricta
Bostr.3640s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold3640: 396677-397176 Boechera stricta
Bostr.3640s0088 1.0kb upstream 1.0kb upstream 2064 true Scaffold3640: 397177-399240 Boechera stricta
Bostr.3640s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold3640: 398241-399240 Boechera stricta
Bostr.3640s0088 1.0kb downstream 1.0kb downstream 2064 true Scaffold3640: 396177-398240 Boechera stricta
Bostr.3640s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold3640: 396177-397176 Boechera stricta
Bostr.3640s0088 2.0kb upstream 2.0kb upstream 3064 true Scaffold3640: 397177-400240 Boechera stricta
Bostr.3640s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold3640: 398241-400240 Boechera stricta
Bostr.3640s0088 2.0kb downstream 2.0kb downstream 3064 true Scaffold3640: 395177-398240 Boechera stricta
Bostr.3640s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold3640: 395177-397176 Boechera stricta
Bostr.3640s0088 5.0kb upstream 5.0kb upstream 6064 true Scaffold3640: 397177-403240 Boechera stricta
Bostr.3640s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold3640: 398241-403240 Boechera stricta
Bostr.3640s0088 5.0kb downstream 5.0kb downstream 6064 true Scaffold3640: 392177-398240 Boechera stricta
Bostr.3640s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold3640: 392177-397176 Boechera stricta
Bostr.3640s0088 10.0kb upstream 10.0kb upstream 11064 true Scaffold3640: 397177-408240 Boechera stricta
Bostr.3640s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold3640: 398241-408240 Boechera stricta
Bostr.3640s0088 10.0kb downstream 10.0kb downstream 11064 true Scaffold3640: 387177-398240 Boechera stricta
Bostr.3640s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold3640: 387177-397176 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364131 5261 Brassicaceae View MSA
123835018 5264 Brassicales-Malvales View MSA
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain