Gene : Bostr.3640s0052 B. stricta v1.2
Defline:  (1 of 57) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  52
Name:  ? Bostr.3640s0052 Secondary Identifier:  ? PAC:30651932
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3640s0052 0.5kb upstream 0.5kb upstream 2671 true Scaffold3640: 184003-186673 Boechera stricta
Bostr.3640s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold3640: 186174-186673 Boechera stricta
Bostr.3640s0052 0.5kb downstream 0.5kb downstream 2671 true Scaffold3640: 183503-186173 Boechera stricta
Bostr.3640s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold3640: 183503-184002 Boechera stricta
Bostr.3640s0052 1.0kb upstream 1.0kb upstream 3171 true Scaffold3640: 184003-187173 Boechera stricta
Bostr.3640s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold3640: 186174-187173 Boechera stricta
Bostr.3640s0052 1.0kb downstream 1.0kb downstream 3171 true Scaffold3640: 183003-186173 Boechera stricta
Bostr.3640s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold3640: 183003-184002 Boechera stricta
Bostr.3640s0052 2.0kb upstream 2.0kb upstream 4171 true Scaffold3640: 184003-188173 Boechera stricta
Bostr.3640s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold3640: 186174-188173 Boechera stricta
Bostr.3640s0052 2.0kb downstream 2.0kb downstream 4171 true Scaffold3640: 182003-186173 Boechera stricta
Bostr.3640s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold3640: 182003-184002 Boechera stricta
Bostr.3640s0052 5.0kb upstream 5.0kb upstream 7171 true Scaffold3640: 184003-191173 Boechera stricta
Bostr.3640s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold3640: 186174-191173 Boechera stricta
Bostr.3640s0052 5.0kb downstream 5.0kb downstream 7171 true Scaffold3640: 179003-186173 Boechera stricta
Bostr.3640s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold3640: 179003-184002 Boechera stricta
Bostr.3640s0052 10.0kb upstream 10.0kb upstream 12171 true Scaffold3640: 184003-196173 Boechera stricta
Bostr.3640s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold3640: 186174-196173 Boechera stricta
Bostr.3640s0052 10.0kb downstream 10.0kb downstream 12171 true Scaffold3640: 174003-186173 Boechera stricta
Bostr.3640s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold3640: 174003-184002 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369566 5261 Brassicaceae View MSA
123831781 5264 Brassicales-Malvales View MSA
124321746 5266 SBM View MSA
124238283 5268 Malvidae View MSA
124063549 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain