Gene : Bostr.3640s0002 B. stricta v1.2

Defline:  (1 of 2) PTHR22952:SF206 - TRANSCRIPTION FACTOR TGA2 Genomic Order:  2
Name:  ? Bostr.3640s0002 Secondary Identifier:  ? PAC:30651874

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3640s0002 0.5kb upstream 0.5kb upstream 4521 true Scaffold3640: 15319-19839 Boechera stricta
Bostr.3640s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3640: 15319-15818 Boechera stricta
Bostr.3640s0002 0.5kb downstream 0.5kb downstream 4521 true Scaffold3640: 15819-20339 Boechera stricta
Bostr.3640s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3640: 19840-20339 Boechera stricta
Bostr.3640s0002 1.0kb upstream 1.0kb upstream 5021 true Scaffold3640: 14819-19839 Boechera stricta
Bostr.3640s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3640: 14819-15818 Boechera stricta
Bostr.3640s0002 1.0kb downstream 1.0kb downstream 5021 true Scaffold3640: 15819-20839 Boechera stricta
Bostr.3640s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3640: 19840-20839 Boechera stricta
Bostr.3640s0002 2.0kb upstream 2.0kb upstream 6021 true Scaffold3640: 13819-19839 Boechera stricta
Bostr.3640s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3640: 13819-15818 Boechera stricta
Bostr.3640s0002 2.0kb downstream 2.0kb downstream 6021 true Scaffold3640: 15819-21839 Boechera stricta
Bostr.3640s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3640: 19840-21839 Boechera stricta
Bostr.3640s0002 5.0kb upstream 5.0kb upstream 9021 true Scaffold3640: 10819-19839 Boechera stricta
Bostr.3640s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3640: 10819-15818 Boechera stricta
Bostr.3640s0002 5.0kb downstream 5.0kb downstream 9021 true Scaffold3640: 15819-24839 Boechera stricta
Bostr.3640s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3640: 19840-24839 Boechera stricta
Bostr.3640s0002 10.0kb upstream 10.0kb upstream 14021 true Scaffold3640: 5819-19839 Boechera stricta
Bostr.3640s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3640: 5819-15818 Boechera stricta
Bostr.3640s0002 10.0kb downstream 10.0kb downstream 14021 true Scaffold3640: 15819-29839 Boechera stricta
Bostr.3640s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold3640: 19840-29839 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381711 5261 Brassicaceae View MSA
123838578 5264 Brassicales-Malvales View MSA
124348363 5266 SBM View MSA
124249581 5268 Malvidae View MSA
124069977 5270 Rosid View MSA
123742396 5271 Pentapetalae View MSA
122790944 5272 Eudicot View MSA
122048650 5273 Angiosperm View MSA
121349382 5274 Embryophyte View MSA
123426504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain