Gene : Bostr.3640s0003 B. stricta v1.2
Defline:  (1 of 1) PTHR12964 - NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT Genomic Order:  3
Name:  ? Bostr.3640s0003 Secondary Identifier:  ? PAC:30651933
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-4302 Boechera stricta pathologic  
Bstricta PWY-5083 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3640s0003 0.5kb upstream 0.5kb upstream 1928 true Scaffold3640: 19854-21781 Boechera stricta
Bostr.3640s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3640: 21282-21781 Boechera stricta
Bostr.3640s0003 0.5kb downstream 0.5kb downstream 1928 true Scaffold3640: 19354-21281 Boechera stricta
Bostr.3640s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3640: 19354-19853 Boechera stricta
Bostr.3640s0003 1.0kb upstream 1.0kb upstream 2428 true Scaffold3640: 19854-22281 Boechera stricta
Bostr.3640s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3640: 21282-22281 Boechera stricta
Bostr.3640s0003 1.0kb downstream 1.0kb downstream 2428 true Scaffold3640: 18854-21281 Boechera stricta
Bostr.3640s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3640: 18854-19853 Boechera stricta
Bostr.3640s0003 2.0kb upstream 2.0kb upstream 3428 true Scaffold3640: 19854-23281 Boechera stricta
Bostr.3640s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3640: 21282-23281 Boechera stricta
Bostr.3640s0003 2.0kb downstream 2.0kb downstream 3428 true Scaffold3640: 17854-21281 Boechera stricta
Bostr.3640s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3640: 17854-19853 Boechera stricta
Bostr.3640s0003 5.0kb upstream 5.0kb upstream 6428 true Scaffold3640: 19854-26281 Boechera stricta
Bostr.3640s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3640: 21282-26281 Boechera stricta
Bostr.3640s0003 5.0kb downstream 5.0kb downstream 6428 true Scaffold3640: 14854-21281 Boechera stricta
Bostr.3640s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3640: 14854-19853 Boechera stricta
Bostr.3640s0003 10.0kb upstream 10.0kb upstream 11428 true Scaffold3640: 19854-31281 Boechera stricta
Bostr.3640s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3640: 21282-31281 Boechera stricta
Bostr.3640s0003 10.0kb downstream 10.0kb downstream 11428 true Scaffold3640: 9854-21281 Boechera stricta
Bostr.3640s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold3640: 9854-19853 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041345 5273 Angiosperm View MSA
122376963 5261 Brassicaceae View MSA
123831504 5264 Brassicales-Malvales View MSA
124343187 5266 SBM View MSA
124239570 5268 Malvidae View MSA
124060660 5270 Rosid View MSA
123740725 5271 Pentapetalae View MSA
122787479 5272 Eudicot View MSA
121345950 5274 Embryophyte View MSA
123424820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain