Gene : Bostr.4824s0057 B. stricta v1.2

Defline:  (1 of 2) PTHR23041:SF64 - E3 UBIQUITIN-PROTEIN LIGASE BAH1 Genomic Order:  57
Name:  ? Bostr.4824s0057 Secondary Identifier:  ? PAC:30670789

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.4824s0057 0.5kb upstream 0.5kb upstream 2652 true Scaffold4824: 235742-238393 Boechera stricta
Bostr.4824s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold4824: 235742-236241 Boechera stricta
Bostr.4824s0057 0.5kb downstream 0.5kb downstream 2652 true Scaffold4824: 236242-238893 Boechera stricta
Bostr.4824s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold4824: 238394-238893 Boechera stricta
Bostr.4824s0057 1.0kb upstream 1.0kb upstream 3152 true Scaffold4824: 235242-238393 Boechera stricta
Bostr.4824s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold4824: 235242-236241 Boechera stricta
Bostr.4824s0057 1.0kb downstream 1.0kb downstream 3152 true Scaffold4824: 236242-239393 Boechera stricta
Bostr.4824s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold4824: 238394-239393 Boechera stricta
Bostr.4824s0057 2.0kb upstream 2.0kb upstream 4152 true Scaffold4824: 234242-238393 Boechera stricta
Bostr.4824s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold4824: 234242-236241 Boechera stricta
Bostr.4824s0057 2.0kb downstream 2.0kb downstream 4152 true Scaffold4824: 236242-240393 Boechera stricta
Bostr.4824s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold4824: 238394-240393 Boechera stricta
Bostr.4824s0057 5.0kb upstream 5.0kb upstream 7152 true Scaffold4824: 231242-238393 Boechera stricta
Bostr.4824s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold4824: 231242-236241 Boechera stricta
Bostr.4824s0057 5.0kb downstream 5.0kb downstream 7152 true Scaffold4824: 236242-243393 Boechera stricta
Bostr.4824s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold4824: 238394-243393 Boechera stricta
Bostr.4824s0057 10.0kb upstream 10.0kb upstream 12152 true Scaffold4824: 226242-238393 Boechera stricta
Bostr.4824s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold4824: 226242-236241 Boechera stricta
Bostr.4824s0057 10.0kb downstream 10.0kb downstream 12152 true Scaffold4824: 236242-248393 Boechera stricta
Bostr.4824s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold4824: 238394-248393 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377622 5261 Brassicaceae View MSA
123828429 5264 Brassicales-Malvales View MSA
124341191 5266 SBM View MSA
124250498 5268 Malvidae View MSA
124062442 5270 Rosid View MSA
123751334 5271 Pentapetalae View MSA
122791887 5272 Eudicot View MSA
122042186 5273 Angiosperm View MSA
121350146 5274 Embryophyte View MSA
123425854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain