Gene : Bostr.3877s0048 B. stricta v1.2
Defline:  (1 of 1) PTHR11751:SF340 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 11-RELATED Genomic Order:  48
Name:  ? Bostr.3877s0048 Secondary Identifier:  ? PAC:30663035
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ETHYL-PWY Boechera stricta pathologic  
Bstricta PWY-7270 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.3877s0048 0.5kb upstream 0.5kb upstream 2593 true Scaffold3877: 567704-570296 Boechera stricta
Bostr.3877s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold3877: 569797-570296 Boechera stricta
Bostr.3877s0048 0.5kb downstream 0.5kb downstream 2593 true Scaffold3877: 567204-569796 Boechera stricta
Bostr.3877s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold3877: 567204-567703 Boechera stricta
Bostr.3877s0048 1.0kb upstream 1.0kb upstream 3093 true Scaffold3877: 567704-570796 Boechera stricta
Bostr.3877s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold3877: 569797-570796 Boechera stricta
Bostr.3877s0048 1.0kb downstream 1.0kb downstream 3093 true Scaffold3877: 566704-569796 Boechera stricta
Bostr.3877s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold3877: 566704-567703 Boechera stricta
Bostr.3877s0048 2.0kb upstream 2.0kb upstream 4093 true Scaffold3877: 567704-571796 Boechera stricta
Bostr.3877s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold3877: 569797-571796 Boechera stricta
Bostr.3877s0048 2.0kb downstream 2.0kb downstream 4093 true Scaffold3877: 565704-569796 Boechera stricta
Bostr.3877s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold3877: 565704-567703 Boechera stricta
Bostr.3877s0048 5.0kb upstream 5.0kb upstream 7093 true Scaffold3877: 567704-574796 Boechera stricta
Bostr.3877s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold3877: 569797-574796 Boechera stricta
Bostr.3877s0048 5.0kb downstream 5.0kb downstream 7093 true Scaffold3877: 562704-569796 Boechera stricta
Bostr.3877s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold3877: 562704-567703 Boechera stricta
Bostr.3877s0048 10.0kb upstream 10.0kb upstream 12093 true Scaffold3877: 567704-579796 Boechera stricta
Bostr.3877s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold3877: 569797-579796 Boechera stricta
Bostr.3877s0048 10.0kb downstream 10.0kb downstream 12093 true Scaffold3877: 557704-569796 Boechera stricta
Bostr.3877s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold3877: 557704-567703 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511314 5273 Angiosperm View MSA
122375111 5261 Brassicaceae View MSA
123800881 5264 Brassicales-Malvales View MSA
124298242 5266 SBM View MSA
124149936 5268 Malvidae View MSA
123875646 5270 Rosid View MSA
123459435 5271 Pentapetalae View MSA
122494826 5272 Eudicot View MSA
120784365 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain