Gene : Bostr.5325s0031 B. stricta v1.2
Defline:  (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  31
Name:  ? Bostr.5325s0031 Secondary Identifier:  ? PAC:30675154
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5173 Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PYRUVDEHYD-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.5325s0031 0.5kb upstream 0.5kb upstream 2535 true Scaffold5325: 205623-208157 Boechera stricta
Bostr.5325s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold5325: 207658-208157 Boechera stricta
Bostr.5325s0031 0.5kb downstream 0.5kb downstream 2535 true Scaffold5325: 205123-207657 Boechera stricta
Bostr.5325s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold5325: 205123-205622 Boechera stricta
Bostr.5325s0031 1.0kb upstream 1.0kb upstream 3035 true Scaffold5325: 205623-208657 Boechera stricta
Bostr.5325s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold5325: 207658-208657 Boechera stricta
Bostr.5325s0031 1.0kb downstream 1.0kb downstream 3035 true Scaffold5325: 204623-207657 Boechera stricta
Bostr.5325s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold5325: 204623-205622 Boechera stricta
Bostr.5325s0031 2.0kb upstream 2.0kb upstream 4035 true Scaffold5325: 205623-209657 Boechera stricta
Bostr.5325s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold5325: 207658-209657 Boechera stricta
Bostr.5325s0031 2.0kb downstream 2.0kb downstream 4035 true Scaffold5325: 203623-207657 Boechera stricta
Bostr.5325s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold5325: 203623-205622 Boechera stricta
Bostr.5325s0031 5.0kb upstream 5.0kb upstream 7035 true Scaffold5325: 205623-212657 Boechera stricta
Bostr.5325s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold5325: 207658-212657 Boechera stricta
Bostr.5325s0031 5.0kb downstream 5.0kb downstream 7035 true Scaffold5325: 200623-207657 Boechera stricta
Bostr.5325s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold5325: 200623-205622 Boechera stricta
Bostr.5325s0031 10.0kb upstream 10.0kb upstream 12035 true Scaffold5325: 205623-217657 Boechera stricta
Bostr.5325s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold5325: 207658-217657 Boechera stricta
Bostr.5325s0031 10.0kb downstream 10.0kb downstream 12035 true Scaffold5325: 195623-207657 Boechera stricta
Bostr.5325s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold5325: 195623-205622 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375294 5261 Brassicaceae View MSA
123835447 5264 Brassicales-Malvales View MSA
124343284 5266 SBM View MSA
124241416 5268 Malvidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain