Gene : Bostr.5094s0001 B. stricta v1.2
Defline:  (1 of 2) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  1
Name:  ? Bostr.5094s0001 Secondary Identifier:  ? PAC:30662730
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6121 Boechera stricta pathologic  
Bstricta PWY-6613 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.5094s0001 0.5kb upstream 0.5kb upstream 1457 true Scaffold5094: 1-1457 Boechera stricta
Bostr.5094s0001 0.5kb upstream 0.5kb upstream 16 false Scaffold5094: 1-16 Boechera stricta
Bostr.5094s0001 0.5kb downstream 0.5kb downstream 1941 true Scaffold5094: 17-1957 Boechera stricta
Bostr.5094s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold5094: 1458-1957 Boechera stricta
Bostr.5094s0001 1.0kb upstream 1.0kb upstream 1457 true Scaffold5094: 1-1457 Boechera stricta
Bostr.5094s0001 1.0kb upstream 1.0kb upstream 16 false Scaffold5094: 1-16 Boechera stricta
Bostr.5094s0001 1.0kb downstream 1.0kb downstream 1969 true Scaffold5094: 17-1985 Boechera stricta
Bostr.5094s0001 1.0kb downstream 1.0kb downstream 528 false Scaffold5094: 1458-1985 Boechera stricta
Bostr.5094s0001 2.0kb upstream 2.0kb upstream 1457 true Scaffold5094: 1-1457 Boechera stricta
Bostr.5094s0001 2.0kb upstream 2.0kb upstream 16 false Scaffold5094: 1-16 Boechera stricta
Bostr.5094s0001 2.0kb downstream 2.0kb downstream 1969 true Scaffold5094: 17-1985 Boechera stricta
Bostr.5094s0001 2.0kb downstream 2.0kb downstream 528 false Scaffold5094: 1458-1985 Boechera stricta
Bostr.5094s0001 5.0kb upstream 5.0kb upstream 1457 true Scaffold5094: 1-1457 Boechera stricta
Bostr.5094s0001 5.0kb upstream 5.0kb upstream 16 false Scaffold5094: 1-16 Boechera stricta
Bostr.5094s0001 5.0kb downstream 5.0kb downstream 1969 true Scaffold5094: 17-1985 Boechera stricta
Bostr.5094s0001 5.0kb downstream 5.0kb downstream 528 false Scaffold5094: 1458-1985 Boechera stricta
Bostr.5094s0001 10.0kb upstream 10.0kb upstream 1457 true Scaffold5094: 1-1457 Boechera stricta
Bostr.5094s0001 10.0kb upstream 10.0kb upstream 16 false Scaffold5094: 1-16 Boechera stricta
Bostr.5094s0001 10.0kb downstream 10.0kb downstream 1969 true Scaffold5094: 17-1985 Boechera stricta
Bostr.5094s0001 10.0kb downstream 10.0kb downstream 528 false Scaffold5094: 1458-1985 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122340403 5261 Brassicaceae Singleton cluster - no MSA
123780844 5264 Brassicales-Malvales Singleton cluster - no MSA
124279141 5266 SBM Singleton cluster - no MSA
124252251 5268 Malvidae View MSA
123952723 5270 Rosid View MSA
123530387 5271 Pentapetalae View MSA
122565352 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain