Gene : Bostr.0556s0484 B. stricta v1.2
Defline:  (1 of 4) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  484
Name:  ? Bostr.0556s0484 Secondary Identifier:  ? PAC:30663877
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0484 0.5kb upstream 0.5kb upstream 2059 true Scaffold556: 2956149-2958207 Boechera stricta
Bostr.0556s0484 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 2956149-2956648 Boechera stricta
Bostr.0556s0484 0.5kb downstream 0.5kb downstream 2059 true Scaffold556: 2956649-2958707 Boechera stricta
Bostr.0556s0484 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 2958208-2958707 Boechera stricta
Bostr.0556s0484 1.0kb upstream 1.0kb upstream 2559 true Scaffold556: 2955649-2958207 Boechera stricta
Bostr.0556s0484 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 2955649-2956648 Boechera stricta
Bostr.0556s0484 1.0kb downstream 1.0kb downstream 2559 true Scaffold556: 2956649-2959207 Boechera stricta
Bostr.0556s0484 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 2958208-2959207 Boechera stricta
Bostr.0556s0484 2.0kb upstream 2.0kb upstream 3559 true Scaffold556: 2954649-2958207 Boechera stricta
Bostr.0556s0484 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 2954649-2956648 Boechera stricta
Bostr.0556s0484 2.0kb downstream 2.0kb downstream 3559 true Scaffold556: 2956649-2960207 Boechera stricta
Bostr.0556s0484 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 2958208-2960207 Boechera stricta
Bostr.0556s0484 5.0kb upstream 5.0kb upstream 6559 true Scaffold556: 2951649-2958207 Boechera stricta
Bostr.0556s0484 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 2951649-2956648 Boechera stricta
Bostr.0556s0484 5.0kb downstream 5.0kb downstream 6559 true Scaffold556: 2956649-2963207 Boechera stricta
Bostr.0556s0484 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 2958208-2963207 Boechera stricta
Bostr.0556s0484 10.0kb upstream 10.0kb upstream 11559 true Scaffold556: 2946649-2958207 Boechera stricta
Bostr.0556s0484 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 2946649-2956648 Boechera stricta
Bostr.0556s0484 10.0kb downstream 10.0kb downstream 11559 true Scaffold556: 2956649-2968207 Boechera stricta
Bostr.0556s0484 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 2958208-2968207 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380418 5261 Brassicaceae View MSA
123835779 5264 Brassicales-Malvales View MSA
124346299 5266 SBM View MSA
124240815 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain