Gene : Bostr.0556s0524 B. stricta v1.2

Defline:  (1 of 1) PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN Genomic Order:  524
Name:  ? Bostr.0556s0524 Secondary Identifier:  ? PAC:30664171

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0524 0.5kb upstream 0.5kb upstream 4641 true Scaffold556: 3172810-3177450 Boechera stricta
Bostr.0556s0524 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 3172810-3173309 Boechera stricta
Bostr.0556s0524 0.5kb downstream 0.5kb downstream 4641 true Scaffold556: 3173310-3177950 Boechera stricta
Bostr.0556s0524 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 3177451-3177950 Boechera stricta
Bostr.0556s0524 1.0kb upstream 1.0kb upstream 5141 true Scaffold556: 3172310-3177450 Boechera stricta
Bostr.0556s0524 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 3172310-3173309 Boechera stricta
Bostr.0556s0524 1.0kb downstream 1.0kb downstream 5141 true Scaffold556: 3173310-3178450 Boechera stricta
Bostr.0556s0524 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 3177451-3178450 Boechera stricta
Bostr.0556s0524 2.0kb upstream 2.0kb upstream 6141 true Scaffold556: 3171310-3177450 Boechera stricta
Bostr.0556s0524 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 3171310-3173309 Boechera stricta
Bostr.0556s0524 2.0kb downstream 2.0kb downstream 6141 true Scaffold556: 3173310-3179450 Boechera stricta
Bostr.0556s0524 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 3177451-3179450 Boechera stricta
Bostr.0556s0524 5.0kb upstream 5.0kb upstream 9141 true Scaffold556: 3168310-3177450 Boechera stricta
Bostr.0556s0524 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 3168310-3173309 Boechera stricta
Bostr.0556s0524 5.0kb downstream 5.0kb downstream 9141 true Scaffold556: 3173310-3182450 Boechera stricta
Bostr.0556s0524 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 3177451-3182450 Boechera stricta
Bostr.0556s0524 10.0kb upstream 10.0kb upstream 14141 true Scaffold556: 3163310-3177450 Boechera stricta
Bostr.0556s0524 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 3163310-3173309 Boechera stricta
Bostr.0556s0524 10.0kb downstream 10.0kb downstream 14141 true Scaffold556: 3173310-3187450 Boechera stricta
Bostr.0556s0524 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 3177451-3187450 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376863 5261 Brassicaceae View MSA
123835840 5264 Brassicales-Malvales View MSA
124342073 5266 SBM View MSA
124242721 5268 Malvidae View MSA
124060640 5270 Rosid View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain