Gene : Bostr.0556s0402 B. stricta v1.2

Defline:  (1 of 2) PTHR22880:SF134 - TRANSCRIPTION FACTOR GTE8-RELATED Genomic Order:  402
Name:  ? Bostr.0556s0402 Secondary Identifier:  ? PAC:30663732

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0402 0.5kb upstream 0.5kb upstream 6186 true Scaffold556: 2395133-2401318 Boechera stricta
Bostr.0556s0402 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 2395133-2395632 Boechera stricta
Bostr.0556s0402 0.5kb downstream 0.5kb downstream 6186 true Scaffold556: 2395633-2401818 Boechera stricta
Bostr.0556s0402 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 2401319-2401818 Boechera stricta
Bostr.0556s0402 1.0kb upstream 1.0kb upstream 6686 true Scaffold556: 2394633-2401318 Boechera stricta
Bostr.0556s0402 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 2394633-2395632 Boechera stricta
Bostr.0556s0402 1.0kb downstream 1.0kb downstream 6686 true Scaffold556: 2395633-2402318 Boechera stricta
Bostr.0556s0402 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 2401319-2402318 Boechera stricta
Bostr.0556s0402 2.0kb upstream 2.0kb upstream 7686 true Scaffold556: 2393633-2401318 Boechera stricta
Bostr.0556s0402 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 2393633-2395632 Boechera stricta
Bostr.0556s0402 2.0kb downstream 2.0kb downstream 7686 true Scaffold556: 2395633-2403318 Boechera stricta
Bostr.0556s0402 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 2401319-2403318 Boechera stricta
Bostr.0556s0402 5.0kb upstream 5.0kb upstream 10686 true Scaffold556: 2390633-2401318 Boechera stricta
Bostr.0556s0402 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 2390633-2395632 Boechera stricta
Bostr.0556s0402 5.0kb downstream 5.0kb downstream 10686 true Scaffold556: 2395633-2406318 Boechera stricta
Bostr.0556s0402 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 2401319-2406318 Boechera stricta
Bostr.0556s0402 10.0kb upstream 10.0kb upstream 15686 true Scaffold556: 2385633-2401318 Boechera stricta
Bostr.0556s0402 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 2385633-2395632 Boechera stricta
Bostr.0556s0402 10.0kb downstream 10.0kb downstream 15686 true Scaffold556: 2395633-2411318 Boechera stricta
Bostr.0556s0402 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 2401319-2411318 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373553 5261 Brassicaceae View MSA
123831663 5264 Brassicales-Malvales View MSA
124341556 5266 SBM View MSA
124251619 5268 Malvidae View MSA
124067873 5270 Rosid View MSA
123742171 5271 Pentapetalae View MSA
122795525 5272 Eudicot View MSA
122044532 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121347470 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain