Gene : Bostr.0556s0400 B. stricta v1.2
Defline:  (1 of 2) PTHR10266 - CYTOCHROME C1 Genomic Order:  400
Name:  ? Bostr.0556s0400 Secondary Identifier:  ? PAC:30663605
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3781 Boechera stricta pathologic  
Bstricta PWY-7279 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0400 0.5kb upstream 0.5kb upstream 3159 true Scaffold556: 2371451-2374609 Boechera stricta
Bostr.0556s0400 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 2374110-2374609 Boechera stricta
Bostr.0556s0400 0.5kb downstream 0.5kb downstream 3159 true Scaffold556: 2370951-2374109 Boechera stricta
Bostr.0556s0400 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 2370951-2371450 Boechera stricta
Bostr.0556s0400 1.0kb upstream 1.0kb upstream 3659 true Scaffold556: 2371451-2375109 Boechera stricta
Bostr.0556s0400 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 2374110-2375109 Boechera stricta
Bostr.0556s0400 1.0kb downstream 1.0kb downstream 3659 true Scaffold556: 2370451-2374109 Boechera stricta
Bostr.0556s0400 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 2370451-2371450 Boechera stricta
Bostr.0556s0400 2.0kb upstream 2.0kb upstream 4659 true Scaffold556: 2371451-2376109 Boechera stricta
Bostr.0556s0400 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 2374110-2376109 Boechera stricta
Bostr.0556s0400 2.0kb downstream 2.0kb downstream 4659 true Scaffold556: 2369451-2374109 Boechera stricta
Bostr.0556s0400 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 2369451-2371450 Boechera stricta
Bostr.0556s0400 5.0kb upstream 5.0kb upstream 7659 true Scaffold556: 2371451-2379109 Boechera stricta
Bostr.0556s0400 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 2374110-2379109 Boechera stricta
Bostr.0556s0400 5.0kb downstream 5.0kb downstream 7659 true Scaffold556: 2366451-2374109 Boechera stricta
Bostr.0556s0400 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 2366451-2371450 Boechera stricta
Bostr.0556s0400 10.0kb upstream 10.0kb upstream 12659 true Scaffold556: 2371451-2384109 Boechera stricta
Bostr.0556s0400 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 2374110-2384109 Boechera stricta
Bostr.0556s0400 10.0kb downstream 10.0kb downstream 12659 true Scaffold556: 2361451-2374109 Boechera stricta
Bostr.0556s0400 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 2361451-2371450 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376312 5261 Brassicaceae View MSA
123830928 5264 Brassicales-Malvales View MSA
124345956 5266 SBM View MSA
124248685 5268 Malvidae View MSA
124073211 5270 Rosid View MSA
123745446 5271 Pentapetalae View MSA
122788425 5272 Eudicot View MSA
122048813 5273 Angiosperm View MSA
121344559 5274 Embryophyte View MSA
123427665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain