Gene : Bostr.0556s0449 B. stricta v1.2

Defline:  (1 of 2) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  449
Name:  ? Bostr.0556s0449 Secondary Identifier:  ? PAC:30664244

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0449 0.5kb upstream 0.5kb upstream 1886 true Scaffold556: 2651833-2653718 Boechera stricta
Bostr.0556s0449 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 2651833-2652332 Boechera stricta
Bostr.0556s0449 0.5kb downstream 0.5kb downstream 1886 true Scaffold556: 2652333-2654218 Boechera stricta
Bostr.0556s0449 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 2653719-2654218 Boechera stricta
Bostr.0556s0449 1.0kb upstream 1.0kb upstream 2386 true Scaffold556: 2651333-2653718 Boechera stricta
Bostr.0556s0449 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 2651333-2652332 Boechera stricta
Bostr.0556s0449 1.0kb downstream 1.0kb downstream 2386 true Scaffold556: 2652333-2654718 Boechera stricta
Bostr.0556s0449 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 2653719-2654718 Boechera stricta
Bostr.0556s0449 2.0kb upstream 2.0kb upstream 3386 true Scaffold556: 2650333-2653718 Boechera stricta
Bostr.0556s0449 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 2650333-2652332 Boechera stricta
Bostr.0556s0449 2.0kb downstream 2.0kb downstream 3386 true Scaffold556: 2652333-2655718 Boechera stricta
Bostr.0556s0449 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 2653719-2655718 Boechera stricta
Bostr.0556s0449 5.0kb upstream 5.0kb upstream 6386 true Scaffold556: 2647333-2653718 Boechera stricta
Bostr.0556s0449 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 2647333-2652332 Boechera stricta
Bostr.0556s0449 5.0kb downstream 5.0kb downstream 6386 true Scaffold556: 2652333-2658718 Boechera stricta
Bostr.0556s0449 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 2653719-2658718 Boechera stricta
Bostr.0556s0449 10.0kb upstream 10.0kb upstream 11386 true Scaffold556: 2642333-2653718 Boechera stricta
Bostr.0556s0449 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 2642333-2652332 Boechera stricta
Bostr.0556s0449 10.0kb downstream 10.0kb downstream 11386 true Scaffold556: 2652333-2663718 Boechera stricta
Bostr.0556s0449 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 2653719-2663718 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
122380433 5261 Brassicaceae View MSA
123832323 5264 Brassicales-Malvales View MSA
124343907 5266 SBM View MSA
124251420 5268 Malvidae View MSA
124062505 5270 Rosid View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain