Gene : Bostr.0556s0334 B. stricta v1.2
Defline:  (1 of 2) 1.2.1.12//1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase // Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Genomic Order:  334
Name:  ? Bostr.0556s0334 Secondary Identifier:  ? PAC:30663581
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ANAEROFRUCAT-PWY Boechera stricta pathologic  
Bstricta ANAGLYCOLYSIS-PWY Boechera stricta pathologic  
Bstricta CALVIN-PWY Boechera stricta pathologic  
Bstricta GLUCONEO-PWY Boechera stricta pathologic  
Bstricta PHOTOALL-PWY Boechera stricta pathologic  
Bstricta PWY-1042 Boechera stricta pathologic  
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY66-399 Boechera stricta pathologic  
Bstricta SUCSYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0334 0.5kb upstream 0.5kb upstream 2460 true Scaffold556: 2020962-2023421 Boechera stricta
Bostr.0556s0334 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 2022922-2023421 Boechera stricta
Bostr.0556s0334 0.5kb downstream 0.5kb downstream 2460 true Scaffold556: 2020462-2022921 Boechera stricta
Bostr.0556s0334 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 2020462-2020961 Boechera stricta
Bostr.0556s0334 1.0kb upstream 1.0kb upstream 2960 true Scaffold556: 2020962-2023921 Boechera stricta
Bostr.0556s0334 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 2022922-2023921 Boechera stricta
Bostr.0556s0334 1.0kb downstream 1.0kb downstream 2960 true Scaffold556: 2019962-2022921 Boechera stricta
Bostr.0556s0334 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 2019962-2020961 Boechera stricta
Bostr.0556s0334 2.0kb upstream 2.0kb upstream 3960 true Scaffold556: 2020962-2024921 Boechera stricta
Bostr.0556s0334 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 2022922-2024921 Boechera stricta
Bostr.0556s0334 2.0kb downstream 2.0kb downstream 3960 true Scaffold556: 2018962-2022921 Boechera stricta
Bostr.0556s0334 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 2018962-2020961 Boechera stricta
Bostr.0556s0334 5.0kb upstream 5.0kb upstream 6960 true Scaffold556: 2020962-2027921 Boechera stricta
Bostr.0556s0334 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 2022922-2027921 Boechera stricta
Bostr.0556s0334 5.0kb downstream 5.0kb downstream 6960 true Scaffold556: 2015962-2022921 Boechera stricta
Bostr.0556s0334 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 2015962-2020961 Boechera stricta
Bostr.0556s0334 10.0kb upstream 10.0kb upstream 11960 true Scaffold556: 2020962-2032921 Boechera stricta
Bostr.0556s0334 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 2022922-2032921 Boechera stricta
Bostr.0556s0334 10.0kb downstream 10.0kb downstream 11960 true Scaffold556: 2010962-2022921 Boechera stricta
Bostr.0556s0334 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 2010962-2020961 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376732 5261 Brassicaceae View MSA
123837960 5264 Brassicales-Malvales View MSA
124344179 5266 SBM View MSA
124254162 5268 Malvidae View MSA
124061607 5270 Rosid View MSA
123737488 5271 Pentapetalae View MSA
122795007 5272 Eudicot View MSA
122045489 5273 Angiosperm View MSA
121346351 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain