Gene : Bostr.0124s0057 B. stricta v1.2
Defline:  (1 of 2) PTHR34191:SF3 - F6D8.10-RELATED Genomic Order:  57
Name:  ? Bostr.0124s0057 Secondary Identifier:  ? PAC:30656363
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLUCONEO-PWY Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0124s0057 0.5kb upstream 0.5kb upstream 2938 true Scaffold124: 304252-307189 Boechera stricta
Bostr.0124s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold124: 306690-307189 Boechera stricta
Bostr.0124s0057 0.5kb downstream 0.5kb downstream 2938 true Scaffold124: 303752-306689 Boechera stricta
Bostr.0124s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold124: 303752-304251 Boechera stricta
Bostr.0124s0057 1.0kb upstream 1.0kb upstream 3438 true Scaffold124: 304252-307689 Boechera stricta
Bostr.0124s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold124: 306690-307689 Boechera stricta
Bostr.0124s0057 1.0kb downstream 1.0kb downstream 3438 true Scaffold124: 303252-306689 Boechera stricta
Bostr.0124s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold124: 303252-304251 Boechera stricta
Bostr.0124s0057 2.0kb upstream 2.0kb upstream 4438 true Scaffold124: 304252-308689 Boechera stricta
Bostr.0124s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold124: 306690-308689 Boechera stricta
Bostr.0124s0057 2.0kb downstream 2.0kb downstream 4438 true Scaffold124: 302252-306689 Boechera stricta
Bostr.0124s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold124: 302252-304251 Boechera stricta
Bostr.0124s0057 5.0kb upstream 5.0kb upstream 7438 true Scaffold124: 304252-311689 Boechera stricta
Bostr.0124s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold124: 306690-311689 Boechera stricta
Bostr.0124s0057 5.0kb downstream 5.0kb downstream 7438 true Scaffold124: 299252-306689 Boechera stricta
Bostr.0124s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold124: 299252-304251 Boechera stricta
Bostr.0124s0057 10.0kb upstream 10.0kb upstream 12438 true Scaffold124: 304252-316689 Boechera stricta
Bostr.0124s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold124: 306690-316689 Boechera stricta
Bostr.0124s0057 10.0kb downstream 10.0kb downstream 12438 true Scaffold124: 294252-306689 Boechera stricta
Bostr.0124s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold124: 294252-304251 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377335 5261 Brassicaceae View MSA
123837740 5264 Brassicales-Malvales View MSA
124322348 5266 SBM View MSA
124248303 5268 Malvidae View MSA
124063227 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain