Gene : Bostr.0116s0001 B. stricta v1.2
Defline:  (1 of 2) PTHR31388:SF16 - PEROXIDASE 14-RELATED Genomic Order:  1
Name:  ? Bostr.0116s0001 Secondary Identifier:  ? PAC:30672070
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0116s0001 0.5kb upstream 0.5kb upstream 1921 true Scaffold116: 52-1972 Boechera stricta
Bostr.0116s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold116: 1473-1972 Boechera stricta
Bostr.0116s0001 0.5kb downstream 0.5kb downstream 1472 true Scaffold116: 1-1472 Boechera stricta
Bostr.0116s0001 0.5kb downstream 0.5kb downstream 51 false Scaffold116: 1-51 Boechera stricta
Bostr.0116s0001 1.0kb upstream 1.0kb upstream 2421 true Scaffold116: 52-2472 Boechera stricta
Bostr.0116s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold116: 1473-2472 Boechera stricta
Bostr.0116s0001 1.0kb downstream 1.0kb downstream 1472 true Scaffold116: 1-1472 Boechera stricta
Bostr.0116s0001 1.0kb downstream 1.0kb downstream 51 false Scaffold116: 1-51 Boechera stricta
Bostr.0116s0001 2.0kb upstream 2.0kb upstream 3326 true Scaffold116: 52-3377 Boechera stricta
Bostr.0116s0001 2.0kb upstream 2.0kb upstream 1905 false Scaffold116: 1473-3377 Boechera stricta
Bostr.0116s0001 2.0kb downstream 2.0kb downstream 1472 true Scaffold116: 1-1472 Boechera stricta
Bostr.0116s0001 2.0kb downstream 2.0kb downstream 51 false Scaffold116: 1-51 Boechera stricta
Bostr.0116s0001 5.0kb upstream 5.0kb upstream 3326 true Scaffold116: 52-3377 Boechera stricta
Bostr.0116s0001 5.0kb upstream 5.0kb upstream 1905 false Scaffold116: 1473-3377 Boechera stricta
Bostr.0116s0001 5.0kb downstream 5.0kb downstream 1472 true Scaffold116: 1-1472 Boechera stricta
Bostr.0116s0001 5.0kb downstream 5.0kb downstream 51 false Scaffold116: 1-51 Boechera stricta
Bostr.0116s0001 10.0kb upstream 10.0kb upstream 3326 true Scaffold116: 52-3377 Boechera stricta
Bostr.0116s0001 10.0kb upstream 10.0kb upstream 1905 false Scaffold116: 1473-3377 Boechera stricta
Bostr.0116s0001 10.0kb downstream 10.0kb downstream 1472 true Scaffold116: 1-1472 Boechera stricta
Bostr.0116s0001 10.0kb downstream 10.0kb downstream 51 false Scaffold116: 1-51 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371157 5261 Brassicaceae View MSA
123841909 5264 Brassicales-Malvales View MSA
124350958 5266 SBM View MSA
124252962 5268 Malvidae View MSA
124074247 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain