Gene : Bostr.0556s0660 B. stricta v1.2
Defline:  (1 of 32) PF12708 - Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  660
Name:  ? Bostr.0556s0660 Secondary Identifier:  ? PAC:30664051
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0660 0.5kb upstream 0.5kb upstream 4013 true Scaffold556: 4181448-4185460 Boechera stricta
Bostr.0556s0660 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 4181448-4181947 Boechera stricta
Bostr.0556s0660 0.5kb downstream 0.5kb downstream 4013 true Scaffold556: 4181948-4185960 Boechera stricta
Bostr.0556s0660 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 4185461-4185960 Boechera stricta
Bostr.0556s0660 1.0kb upstream 1.0kb upstream 4513 true Scaffold556: 4180948-4185460 Boechera stricta
Bostr.0556s0660 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 4180948-4181947 Boechera stricta
Bostr.0556s0660 1.0kb downstream 1.0kb downstream 4513 true Scaffold556: 4181948-4186460 Boechera stricta
Bostr.0556s0660 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 4185461-4186460 Boechera stricta
Bostr.0556s0660 2.0kb upstream 2.0kb upstream 5513 true Scaffold556: 4179948-4185460 Boechera stricta
Bostr.0556s0660 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 4179948-4181947 Boechera stricta
Bostr.0556s0660 2.0kb downstream 2.0kb downstream 5513 true Scaffold556: 4181948-4187460 Boechera stricta
Bostr.0556s0660 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 4185461-4187460 Boechera stricta
Bostr.0556s0660 5.0kb upstream 5.0kb upstream 8513 true Scaffold556: 4176948-4185460 Boechera stricta
Bostr.0556s0660 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 4176948-4181947 Boechera stricta
Bostr.0556s0660 5.0kb downstream 5.0kb downstream 8513 true Scaffold556: 4181948-4190460 Boechera stricta
Bostr.0556s0660 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 4185461-4190460 Boechera stricta
Bostr.0556s0660 10.0kb upstream 10.0kb upstream 13513 true Scaffold556: 4171948-4185460 Boechera stricta
Bostr.0556s0660 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 4171948-4181947 Boechera stricta
Bostr.0556s0660 10.0kb downstream 10.0kb downstream 13513 true Scaffold556: 4181948-4195460 Boechera stricta
Bostr.0556s0660 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 4185461-4195460 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026431 5273 Angiosperm View MSA
122367516 5261 Brassicaceae View MSA
123799375 5264 Brassicales-Malvales View MSA
124296901 5266 SBM View MSA
124249654 5268 Malvidae View MSA
124066643 5270 Rosid View MSA
123751274 5271 Pentapetalae View MSA
122794411 5272 Eudicot View MSA
121348629 5274 Embryophyte View MSA
123380947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain