Gene : Bostr.0556s0576 B. stricta v1.2
Defline:  (1 of 3) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  576
Name:  ? Bostr.0556s0576 Secondary Identifier:  ? PAC:30664143
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-3461 Boechera stricta pathologic  
Bstricta PWY-3462 Boechera stricta pathologic  
Bstricta PWY-3481 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0556s0576 0.5kb upstream 0.5kb upstream 2672 true Scaffold556: 3597711-3600382 Boechera stricta
Bostr.0556s0576 0.5kb upstream 0.5kb upstream 500 false Scaffold556: 3599883-3600382 Boechera stricta
Bostr.0556s0576 0.5kb downstream 0.5kb downstream 2672 true Scaffold556: 3597211-3599882 Boechera stricta
Bostr.0556s0576 0.5kb downstream 0.5kb downstream 500 false Scaffold556: 3597211-3597710 Boechera stricta
Bostr.0556s0576 1.0kb upstream 1.0kb upstream 3172 true Scaffold556: 3597711-3600882 Boechera stricta
Bostr.0556s0576 1.0kb upstream 1.0kb upstream 1000 false Scaffold556: 3599883-3600882 Boechera stricta
Bostr.0556s0576 1.0kb downstream 1.0kb downstream 3172 true Scaffold556: 3596711-3599882 Boechera stricta
Bostr.0556s0576 1.0kb downstream 1.0kb downstream 1000 false Scaffold556: 3596711-3597710 Boechera stricta
Bostr.0556s0576 2.0kb upstream 2.0kb upstream 4172 true Scaffold556: 3597711-3601882 Boechera stricta
Bostr.0556s0576 2.0kb upstream 2.0kb upstream 2000 false Scaffold556: 3599883-3601882 Boechera stricta
Bostr.0556s0576 2.0kb downstream 2.0kb downstream 4172 true Scaffold556: 3595711-3599882 Boechera stricta
Bostr.0556s0576 2.0kb downstream 2.0kb downstream 2000 false Scaffold556: 3595711-3597710 Boechera stricta
Bostr.0556s0576 5.0kb upstream 5.0kb upstream 7172 true Scaffold556: 3597711-3604882 Boechera stricta
Bostr.0556s0576 5.0kb upstream 5.0kb upstream 5000 false Scaffold556: 3599883-3604882 Boechera stricta
Bostr.0556s0576 5.0kb downstream 5.0kb downstream 7172 true Scaffold556: 3592711-3599882 Boechera stricta
Bostr.0556s0576 5.0kb downstream 5.0kb downstream 5000 false Scaffold556: 3592711-3597710 Boechera stricta
Bostr.0556s0576 10.0kb upstream 10.0kb upstream 12172 true Scaffold556: 3597711-3609882 Boechera stricta
Bostr.0556s0576 10.0kb upstream 10.0kb upstream 10000 false Scaffold556: 3599883-3609882 Boechera stricta
Bostr.0556s0576 10.0kb downstream 10.0kb downstream 12172 true Scaffold556: 3587711-3599882 Boechera stricta
Bostr.0556s0576 10.0kb downstream 10.0kb downstream 10000 false Scaffold556: 3587711-3597710 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122372904 5261 Brassicaceae View MSA
123828372 5264 Brassicales-Malvales View MSA
124336779 5266 SBM View MSA
124252605 5268 Malvidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain