Gene : Bostr.0568s0276 B. stricta v1.2

Defline:  (1 of 2) PTHR22904:SF358 - CC-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  276
Name:  ? Bostr.0568s0276 Secondary Identifier:  ? PAC:30669173

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0568s0276 0.5kb upstream 0.5kb upstream 3294 true Scaffold568: 1269018-1272311 Boechera stricta
Bostr.0568s0276 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 1269018-1269517 Boechera stricta
Bostr.0568s0276 0.5kb downstream 0.5kb downstream 3294 true Scaffold568: 1269518-1272811 Boechera stricta
Bostr.0568s0276 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 1272312-1272811 Boechera stricta
Bostr.0568s0276 1.0kb upstream 1.0kb upstream 3794 true Scaffold568: 1268518-1272311 Boechera stricta
Bostr.0568s0276 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 1268518-1269517 Boechera stricta
Bostr.0568s0276 1.0kb downstream 1.0kb downstream 3794 true Scaffold568: 1269518-1273311 Boechera stricta
Bostr.0568s0276 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 1272312-1273311 Boechera stricta
Bostr.0568s0276 2.0kb upstream 2.0kb upstream 4794 true Scaffold568: 1267518-1272311 Boechera stricta
Bostr.0568s0276 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 1267518-1269517 Boechera stricta
Bostr.0568s0276 2.0kb downstream 2.0kb downstream 4794 true Scaffold568: 1269518-1274311 Boechera stricta
Bostr.0568s0276 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 1272312-1274311 Boechera stricta
Bostr.0568s0276 5.0kb upstream 5.0kb upstream 7794 true Scaffold568: 1264518-1272311 Boechera stricta
Bostr.0568s0276 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 1264518-1269517 Boechera stricta
Bostr.0568s0276 5.0kb downstream 5.0kb downstream 7794 true Scaffold568: 1269518-1277311 Boechera stricta
Bostr.0568s0276 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 1272312-1277311 Boechera stricta
Bostr.0568s0276 10.0kb upstream 10.0kb upstream 12794 true Scaffold568: 1259518-1272311 Boechera stricta
Bostr.0568s0276 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 1259518-1269517 Boechera stricta
Bostr.0568s0276 10.0kb downstream 10.0kb downstream 12794 true Scaffold568: 1269518-1282311 Boechera stricta
Bostr.0568s0276 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 1272312-1282311 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364740 5261 Brassicaceae View MSA
123838346 5264 Brassicales-Malvales View MSA
124343835 5266 SBM View MSA
124254049 5268 Malvidae View MSA
124063288 5270 Rosid View MSA
123737789 5271 Pentapetalae View MSA
122790297 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain