Gene : Bostr.0568s0030 B. stricta v1.2
Defline:  (1 of 2) PTHR19384//PTHR19384:SF82 - FLAVODOXIN-RELATED Genomic Order:  30
Name:  ? Bostr.0568s0030 Secondary Identifier:  ? PAC:30669251
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PHOTOALL-PWY Boechera stricta pathologic  
Bstricta PWY-101 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0568s0030 0.5kb upstream 0.5kb upstream 2769 true Scaffold568: 95676-98444 Boechera stricta
Bostr.0568s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 97945-98444 Boechera stricta
Bostr.0568s0030 0.5kb downstream 0.5kb downstream 2769 true Scaffold568: 95176-97944 Boechera stricta
Bostr.0568s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 95176-95675 Boechera stricta
Bostr.0568s0030 1.0kb upstream 1.0kb upstream 3269 true Scaffold568: 95676-98944 Boechera stricta
Bostr.0568s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 97945-98944 Boechera stricta
Bostr.0568s0030 1.0kb downstream 1.0kb downstream 3269 true Scaffold568: 94676-97944 Boechera stricta
Bostr.0568s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 94676-95675 Boechera stricta
Bostr.0568s0030 2.0kb upstream 2.0kb upstream 4269 true Scaffold568: 95676-99944 Boechera stricta
Bostr.0568s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 97945-99944 Boechera stricta
Bostr.0568s0030 2.0kb downstream 2.0kb downstream 4269 true Scaffold568: 93676-97944 Boechera stricta
Bostr.0568s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 93676-95675 Boechera stricta
Bostr.0568s0030 5.0kb upstream 5.0kb upstream 7269 true Scaffold568: 95676-102944 Boechera stricta
Bostr.0568s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 97945-102944 Boechera stricta
Bostr.0568s0030 5.0kb downstream 5.0kb downstream 7269 true Scaffold568: 90676-97944 Boechera stricta
Bostr.0568s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 90676-95675 Boechera stricta
Bostr.0568s0030 10.0kb upstream 10.0kb upstream 12269 true Scaffold568: 95676-107944 Boechera stricta
Bostr.0568s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 97945-107944 Boechera stricta
Bostr.0568s0030 10.0kb downstream 10.0kb downstream 12269 true Scaffold568: 85676-97944 Boechera stricta
Bostr.0568s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 85676-95675 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371339 5261 Brassicaceae View MSA
123832718 5264 Brassicales-Malvales View MSA
124346878 5266 SBM View MSA
124237795 5268 Malvidae View MSA
124067432 5270 Rosid View MSA
123738149 5271 Pentapetalae View MSA
122792812 5272 Eudicot View MSA
122047092 5273 Angiosperm View MSA
121345417 5274 Embryophyte View MSA
123380214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain