Gene : Bostr.0697s0152 B. stricta v1.2
Defline:  (1 of 1) PTHR11946:SF89 - METHIONYL-TRNA SYNTHETASE Genomic Order:  152
Name:  ? Bostr.0697s0152 Secondary Identifier:  ? PAC:30678733
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0697s0152 0.5kb upstream 0.5kb upstream 3904 true Scaffold697: 834803-838706 Boechera stricta
Bostr.0697s0152 0.5kb upstream 0.5kb upstream 500 false Scaffold697: 838207-838706 Boechera stricta
Bostr.0697s0152 0.5kb downstream 0.5kb downstream 3904 true Scaffold697: 834303-838206 Boechera stricta
Bostr.0697s0152 0.5kb downstream 0.5kb downstream 500 false Scaffold697: 834303-834802 Boechera stricta
Bostr.0697s0152 1.0kb upstream 1.0kb upstream 4404 true Scaffold697: 834803-839206 Boechera stricta
Bostr.0697s0152 1.0kb upstream 1.0kb upstream 1000 false Scaffold697: 838207-839206 Boechera stricta
Bostr.0697s0152 1.0kb downstream 1.0kb downstream 4404 true Scaffold697: 833803-838206 Boechera stricta
Bostr.0697s0152 1.0kb downstream 1.0kb downstream 1000 false Scaffold697: 833803-834802 Boechera stricta
Bostr.0697s0152 2.0kb upstream 2.0kb upstream 5404 true Scaffold697: 834803-840206 Boechera stricta
Bostr.0697s0152 2.0kb upstream 2.0kb upstream 2000 false Scaffold697: 838207-840206 Boechera stricta
Bostr.0697s0152 2.0kb downstream 2.0kb downstream 5404 true Scaffold697: 832803-838206 Boechera stricta
Bostr.0697s0152 2.0kb downstream 2.0kb downstream 2000 false Scaffold697: 832803-834802 Boechera stricta
Bostr.0697s0152 5.0kb upstream 5.0kb upstream 8404 true Scaffold697: 834803-843206 Boechera stricta
Bostr.0697s0152 5.0kb upstream 5.0kb upstream 5000 false Scaffold697: 838207-843206 Boechera stricta
Bostr.0697s0152 5.0kb downstream 5.0kb downstream 8404 true Scaffold697: 829803-838206 Boechera stricta
Bostr.0697s0152 5.0kb downstream 5.0kb downstream 5000 false Scaffold697: 829803-834802 Boechera stricta
Bostr.0697s0152 10.0kb upstream 10.0kb upstream 13404 true Scaffold697: 834803-848206 Boechera stricta
Bostr.0697s0152 10.0kb upstream 10.0kb upstream 10000 false Scaffold697: 838207-848206 Boechera stricta
Bostr.0697s0152 10.0kb downstream 10.0kb downstream 13404 true Scaffold697: 824803-838206 Boechera stricta
Bostr.0697s0152 10.0kb downstream 10.0kb downstream 10000 false Scaffold697: 824803-834802 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362064 5261 Brassicaceae View MSA
123831392 5264 Brassicales-Malvales View MSA
124342754 5266 SBM View MSA
124242853 5268 Malvidae View MSA
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain