Gene : Bostr.0697s0154 B. stricta v1.2
Defline:  (1 of 2) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Genomic Order:  154
Name:  ? Bostr.0697s0154 Secondary Identifier:  ? PAC:30678807
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5084 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0697s0154 0.5kb upstream 0.5kb upstream 5129 true Scaffold697: 842846-847974 Boechera stricta
Bostr.0697s0154 0.5kb upstream 0.5kb upstream 500 false Scaffold697: 842846-843345 Boechera stricta
Bostr.0697s0154 0.5kb downstream 0.5kb downstream 5129 true Scaffold697: 843346-848474 Boechera stricta
Bostr.0697s0154 0.5kb downstream 0.5kb downstream 500 false Scaffold697: 847975-848474 Boechera stricta
Bostr.0697s0154 1.0kb upstream 1.0kb upstream 5629 true Scaffold697: 842346-847974 Boechera stricta
Bostr.0697s0154 1.0kb upstream 1.0kb upstream 1000 false Scaffold697: 842346-843345 Boechera stricta
Bostr.0697s0154 1.0kb downstream 1.0kb downstream 5629 true Scaffold697: 843346-848974 Boechera stricta
Bostr.0697s0154 1.0kb downstream 1.0kb downstream 1000 false Scaffold697: 847975-848974 Boechera stricta
Bostr.0697s0154 2.0kb upstream 2.0kb upstream 6629 true Scaffold697: 841346-847974 Boechera stricta
Bostr.0697s0154 2.0kb upstream 2.0kb upstream 2000 false Scaffold697: 841346-843345 Boechera stricta
Bostr.0697s0154 2.0kb downstream 2.0kb downstream 6629 true Scaffold697: 843346-849974 Boechera stricta
Bostr.0697s0154 2.0kb downstream 2.0kb downstream 2000 false Scaffold697: 847975-849974 Boechera stricta
Bostr.0697s0154 5.0kb upstream 5.0kb upstream 9629 true Scaffold697: 838346-847974 Boechera stricta
Bostr.0697s0154 5.0kb upstream 5.0kb upstream 5000 false Scaffold697: 838346-843345 Boechera stricta
Bostr.0697s0154 5.0kb downstream 5.0kb downstream 9629 true Scaffold697: 843346-852974 Boechera stricta
Bostr.0697s0154 5.0kb downstream 5.0kb downstream 5000 false Scaffold697: 847975-852974 Boechera stricta
Bostr.0697s0154 10.0kb upstream 10.0kb upstream 14629 true Scaffold697: 833346-847974 Boechera stricta
Bostr.0697s0154 10.0kb upstream 10.0kb upstream 10000 false Scaffold697: 833346-843345 Boechera stricta
Bostr.0697s0154 10.0kb downstream 10.0kb downstream 14255 true Scaffold697: 843346-857600 Boechera stricta
Bostr.0697s0154 10.0kb downstream 10.0kb downstream 9626 false Scaffold697: 847975-857600 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377331 5261 Brassicaceae View MSA
123838611 5264 Brassicales-Malvales View MSA
124343365 5266 SBM View MSA
124239767 5268 Malvidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain