Gene : Bostr.1040s0047 B. stricta v1.2
Defline:  (1 of 1) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  47
Name:  ? Bostr.1040s0047 Secondary Identifier:  ? PAC:30655075
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1040s0047 0.5kb upstream 0.5kb upstream 3588 true Scaffold1040: 520390-523977 Boechera stricta
Bostr.1040s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold1040: 520390-520889 Boechera stricta
Bostr.1040s0047 0.5kb downstream 0.5kb downstream 3588 true Scaffold1040: 520890-524477 Boechera stricta
Bostr.1040s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold1040: 523978-524477 Boechera stricta
Bostr.1040s0047 1.0kb upstream 1.0kb upstream 4088 true Scaffold1040: 519890-523977 Boechera stricta
Bostr.1040s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold1040: 519890-520889 Boechera stricta
Bostr.1040s0047 1.0kb downstream 1.0kb downstream 4088 true Scaffold1040: 520890-524977 Boechera stricta
Bostr.1040s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold1040: 523978-524977 Boechera stricta
Bostr.1040s0047 2.0kb upstream 2.0kb upstream 5088 true Scaffold1040: 518890-523977 Boechera stricta
Bostr.1040s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold1040: 518890-520889 Boechera stricta
Bostr.1040s0047 2.0kb downstream 2.0kb downstream 5088 true Scaffold1040: 520890-525977 Boechera stricta
Bostr.1040s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold1040: 523978-525977 Boechera stricta
Bostr.1040s0047 5.0kb upstream 5.0kb upstream 8088 true Scaffold1040: 515890-523977 Boechera stricta
Bostr.1040s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold1040: 515890-520889 Boechera stricta
Bostr.1040s0047 5.0kb downstream 5.0kb downstream 8088 true Scaffold1040: 520890-528977 Boechera stricta
Bostr.1040s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold1040: 523978-528977 Boechera stricta
Bostr.1040s0047 10.0kb upstream 10.0kb upstream 13088 true Scaffold1040: 510890-523977 Boechera stricta
Bostr.1040s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold1040: 510890-520889 Boechera stricta
Bostr.1040s0047 10.0kb downstream 10.0kb downstream 13088 true Scaffold1040: 520890-533977 Boechera stricta
Bostr.1040s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold1040: 523978-533977 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366056 5261 Brassicaceae View MSA
123840797 5264 Brassicales-Malvales View MSA
124337965 5266 SBM View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain