Gene : Bostr.1040s0059 B. stricta v1.2
Defline:  (1 of 1) PTHR13872:SF23 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  59
Name:  ? Bostr.1040s0059 Secondary Identifier:  ? PAC:30655058
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1040s0059 0.5kb upstream 0.5kb upstream 4184 true Scaffold1040: 676987-681170 Boechera stricta
Bostr.1040s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold1040: 680671-681170 Boechera stricta
Bostr.1040s0059 0.5kb downstream 0.5kb downstream 4184 true Scaffold1040: 676487-680670 Boechera stricta
Bostr.1040s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold1040: 676487-676986 Boechera stricta
Bostr.1040s0059 1.0kb upstream 1.0kb upstream 4684 true Scaffold1040: 676987-681670 Boechera stricta
Bostr.1040s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold1040: 680671-681670 Boechera stricta
Bostr.1040s0059 1.0kb downstream 1.0kb downstream 4684 true Scaffold1040: 675987-680670 Boechera stricta
Bostr.1040s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold1040: 675987-676986 Boechera stricta
Bostr.1040s0059 2.0kb upstream 2.0kb upstream 5684 true Scaffold1040: 676987-682670 Boechera stricta
Bostr.1040s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold1040: 680671-682670 Boechera stricta
Bostr.1040s0059 2.0kb downstream 2.0kb downstream 5684 true Scaffold1040: 674987-680670 Boechera stricta
Bostr.1040s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold1040: 674987-676986 Boechera stricta
Bostr.1040s0059 5.0kb upstream 5.0kb upstream 8684 true Scaffold1040: 676987-685670 Boechera stricta
Bostr.1040s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold1040: 680671-685670 Boechera stricta
Bostr.1040s0059 5.0kb downstream 5.0kb downstream 8684 true Scaffold1040: 671987-680670 Boechera stricta
Bostr.1040s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold1040: 671987-676986 Boechera stricta
Bostr.1040s0059 10.0kb upstream 10.0kb upstream 13684 true Scaffold1040: 676987-690670 Boechera stricta
Bostr.1040s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold1040: 680671-690670 Boechera stricta
Bostr.1040s0059 10.0kb downstream 10.0kb downstream 13684 true Scaffold1040: 666987-680670 Boechera stricta
Bostr.1040s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold1040: 666987-676986 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377383 5261 Brassicaceae View MSA
123836539 5264 Brassicales-Malvales View MSA
124338234 5266 SBM View MSA
124250175 5268 Malvidae View MSA
124065943 5270 Rosid View MSA
123746907 5271 Pentapetalae View MSA
122791505 5272 Eudicot View MSA
122045472 5273 Angiosperm View MSA
121344925 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain