Gene : Bostr.0568s0451 B. stricta v1.2
Defline:  (1 of 2) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Genomic Order:  451
Name:  ? Bostr.0568s0451 Secondary Identifier:  ? PAC:30669638
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5188 Boechera stricta pathologic  
Bstricta PWY-5918 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0568s0451 0.5kb upstream 0.5kb upstream 2639 true Scaffold568: 2104022-2106660 Boechera stricta
Bostr.0568s0451 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 2106161-2106660 Boechera stricta
Bostr.0568s0451 0.5kb downstream 0.5kb downstream 2639 true Scaffold568: 2103522-2106160 Boechera stricta
Bostr.0568s0451 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 2103522-2104021 Boechera stricta
Bostr.0568s0451 1.0kb upstream 1.0kb upstream 3139 true Scaffold568: 2104022-2107160 Boechera stricta
Bostr.0568s0451 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 2106161-2107160 Boechera stricta
Bostr.0568s0451 1.0kb downstream 1.0kb downstream 3139 true Scaffold568: 2103022-2106160 Boechera stricta
Bostr.0568s0451 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 2103022-2104021 Boechera stricta
Bostr.0568s0451 2.0kb upstream 2.0kb upstream 4139 true Scaffold568: 2104022-2108160 Boechera stricta
Bostr.0568s0451 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 2106161-2108160 Boechera stricta
Bostr.0568s0451 2.0kb downstream 2.0kb downstream 4139 true Scaffold568: 2102022-2106160 Boechera stricta
Bostr.0568s0451 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 2102022-2104021 Boechera stricta
Bostr.0568s0451 5.0kb upstream 5.0kb upstream 7139 true Scaffold568: 2104022-2111160 Boechera stricta
Bostr.0568s0451 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 2106161-2111160 Boechera stricta
Bostr.0568s0451 5.0kb downstream 5.0kb downstream 7139 true Scaffold568: 2099022-2106160 Boechera stricta
Bostr.0568s0451 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 2099022-2104021 Boechera stricta
Bostr.0568s0451 10.0kb upstream 10.0kb upstream 12139 true Scaffold568: 2104022-2116160 Boechera stricta
Bostr.0568s0451 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 2106161-2116160 Boechera stricta
Bostr.0568s0451 10.0kb downstream 10.0kb downstream 12139 true Scaffold568: 2094022-2106160 Boechera stricta
Bostr.0568s0451 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 2094022-2104021 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367010 5261 Brassicaceae View MSA
123838013 5264 Brassicales-Malvales View MSA
124339096 5266 SBM View MSA
124239994 5268 Malvidae View MSA
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain