Gene : Bostr.0568s0399 B. stricta v1.2
Defline:  (1 of 2) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  399
Name:  ? Bostr.0568s0399 Secondary Identifier:  ? PAC:30669280
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5188 Boechera stricta pathologic  
Bstricta PWY-5918 Boechera stricta pathologic  
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.0568s0399 0.5kb upstream 0.5kb upstream 3701 true Scaffold568: 1854750-1858450 Boechera stricta
Bostr.0568s0399 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 1854750-1855249 Boechera stricta
Bostr.0568s0399 0.5kb downstream 0.5kb downstream 3701 true Scaffold568: 1855250-1858950 Boechera stricta
Bostr.0568s0399 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 1858451-1858950 Boechera stricta
Bostr.0568s0399 1.0kb upstream 1.0kb upstream 4201 true Scaffold568: 1854250-1858450 Boechera stricta
Bostr.0568s0399 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 1854250-1855249 Boechera stricta
Bostr.0568s0399 1.0kb downstream 1.0kb downstream 4201 true Scaffold568: 1855250-1859450 Boechera stricta
Bostr.0568s0399 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 1858451-1859450 Boechera stricta
Bostr.0568s0399 2.0kb upstream 2.0kb upstream 5201 true Scaffold568: 1853250-1858450 Boechera stricta
Bostr.0568s0399 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 1853250-1855249 Boechera stricta
Bostr.0568s0399 2.0kb downstream 2.0kb downstream 5201 true Scaffold568: 1855250-1860450 Boechera stricta
Bostr.0568s0399 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 1858451-1860450 Boechera stricta
Bostr.0568s0399 5.0kb upstream 5.0kb upstream 8201 true Scaffold568: 1850250-1858450 Boechera stricta
Bostr.0568s0399 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 1850250-1855249 Boechera stricta
Bostr.0568s0399 5.0kb downstream 5.0kb downstream 8201 true Scaffold568: 1855250-1863450 Boechera stricta
Bostr.0568s0399 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 1858451-1863450 Boechera stricta
Bostr.0568s0399 10.0kb upstream 10.0kb upstream 13201 true Scaffold568: 1845250-1858450 Boechera stricta
Bostr.0568s0399 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 1845250-1855249 Boechera stricta
Bostr.0568s0399 10.0kb downstream 10.0kb downstream 13201 true Scaffold568: 1855250-1868450 Boechera stricta
Bostr.0568s0399 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 1858451-1868450 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368604 5261 Brassicaceae View MSA
123832530 5264 Brassicales-Malvales View MSA
124344288 5266 SBM View MSA
124238938 5268 Malvidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain