Gene : Bostr.2570s0082 B. stricta v1.2
Defline:  (1 of 3) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  82
Name:  ? Bostr.2570s0082 Secondary Identifier:  ? PAC:30666575
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2570s0082 0.5kb upstream 0.5kb upstream 1394 true Scaffold2570: 402113-403506 Boechera stricta
Bostr.2570s0082 0.5kb upstream 0.5kb upstream 500 false Scaffold2570: 402113-402612 Boechera stricta
Bostr.2570s0082 0.5kb downstream 0.5kb downstream 1394 true Scaffold2570: 402613-404006 Boechera stricta
Bostr.2570s0082 0.5kb downstream 0.5kb downstream 500 false Scaffold2570: 403507-404006 Boechera stricta
Bostr.2570s0082 1.0kb upstream 1.0kb upstream 1894 true Scaffold2570: 401613-403506 Boechera stricta
Bostr.2570s0082 1.0kb upstream 1.0kb upstream 1000 false Scaffold2570: 401613-402612 Boechera stricta
Bostr.2570s0082 1.0kb downstream 1.0kb downstream 1894 true Scaffold2570: 402613-404506 Boechera stricta
Bostr.2570s0082 1.0kb downstream 1.0kb downstream 1000 false Scaffold2570: 403507-404506 Boechera stricta
Bostr.2570s0082 2.0kb upstream 2.0kb upstream 2894 true Scaffold2570: 400613-403506 Boechera stricta
Bostr.2570s0082 2.0kb upstream 2.0kb upstream 2000 false Scaffold2570: 400613-402612 Boechera stricta
Bostr.2570s0082 2.0kb downstream 2.0kb downstream 2894 true Scaffold2570: 402613-405506 Boechera stricta
Bostr.2570s0082 2.0kb downstream 2.0kb downstream 2000 false Scaffold2570: 403507-405506 Boechera stricta
Bostr.2570s0082 5.0kb upstream 5.0kb upstream 5894 true Scaffold2570: 397613-403506 Boechera stricta
Bostr.2570s0082 5.0kb upstream 5.0kb upstream 5000 false Scaffold2570: 397613-402612 Boechera stricta
Bostr.2570s0082 5.0kb downstream 5.0kb downstream 5894 true Scaffold2570: 402613-408506 Boechera stricta
Bostr.2570s0082 5.0kb downstream 5.0kb downstream 5000 false Scaffold2570: 403507-408506 Boechera stricta
Bostr.2570s0082 10.0kb upstream 10.0kb upstream 10894 true Scaffold2570: 392613-403506 Boechera stricta
Bostr.2570s0082 10.0kb upstream 10.0kb upstream 10000 false Scaffold2570: 392613-402612 Boechera stricta
Bostr.2570s0082 10.0kb downstream 10.0kb downstream 10894 true Scaffold2570: 402613-413506 Boechera stricta
Bostr.2570s0082 10.0kb downstream 10.0kb downstream 10000 false Scaffold2570: 403507-413506 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341023 5261 Brassicaceae Singleton cluster - no MSA
123841143 5264 Brassicales-Malvales View MSA
124347196 5266 SBM View MSA
124250364 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain