Gene : Bostr.2128s0113 B. stricta v1.2
Defline:  (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  113
Name:  ? Bostr.2128s0113 Secondary Identifier:  ? PAC:30659137
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2128s0113 0.5kb upstream 0.5kb upstream 3324 true Scaffold2128: 534992-538315 Boechera stricta
Bostr.2128s0113 0.5kb upstream 0.5kb upstream 500 false Scaffold2128: 537816-538315 Boechera stricta
Bostr.2128s0113 0.5kb downstream 0.5kb downstream 3324 true Scaffold2128: 534492-537815 Boechera stricta
Bostr.2128s0113 0.5kb downstream 0.5kb downstream 500 false Scaffold2128: 534492-534991 Boechera stricta
Bostr.2128s0113 1.0kb upstream 1.0kb upstream 3824 true Scaffold2128: 534992-538815 Boechera stricta
Bostr.2128s0113 1.0kb upstream 1.0kb upstream 1000 false Scaffold2128: 537816-538815 Boechera stricta
Bostr.2128s0113 1.0kb downstream 1.0kb downstream 3824 true Scaffold2128: 533992-537815 Boechera stricta
Bostr.2128s0113 1.0kb downstream 1.0kb downstream 1000 false Scaffold2128: 533992-534991 Boechera stricta
Bostr.2128s0113 2.0kb upstream 2.0kb upstream 4824 true Scaffold2128: 534992-539815 Boechera stricta
Bostr.2128s0113 2.0kb upstream 2.0kb upstream 2000 false Scaffold2128: 537816-539815 Boechera stricta
Bostr.2128s0113 2.0kb downstream 2.0kb downstream 4824 true Scaffold2128: 532992-537815 Boechera stricta
Bostr.2128s0113 2.0kb downstream 2.0kb downstream 2000 false Scaffold2128: 532992-534991 Boechera stricta
Bostr.2128s0113 5.0kb upstream 5.0kb upstream 7824 true Scaffold2128: 534992-542815 Boechera stricta
Bostr.2128s0113 5.0kb upstream 5.0kb upstream 5000 false Scaffold2128: 537816-542815 Boechera stricta
Bostr.2128s0113 5.0kb downstream 5.0kb downstream 7824 true Scaffold2128: 529992-537815 Boechera stricta
Bostr.2128s0113 5.0kb downstream 5.0kb downstream 5000 false Scaffold2128: 529992-534991 Boechera stricta
Bostr.2128s0113 10.0kb upstream 10.0kb upstream 12824 true Scaffold2128: 534992-547815 Boechera stricta
Bostr.2128s0113 10.0kb upstream 10.0kb upstream 10000 false Scaffold2128: 537816-547815 Boechera stricta
Bostr.2128s0113 10.0kb downstream 10.0kb downstream 12824 true Scaffold2128: 524992-537815 Boechera stricta
Bostr.2128s0113 10.0kb downstream 10.0kb downstream 10000 false Scaffold2128: 524992-534991 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371522 5261 Brassicaceae View MSA
123828027 5264 Brassicales-Malvales View MSA
124321502 5266 SBM View MSA
124242032 5268 Malvidae View MSA
124069172 5270 Rosid View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain