Gene : Bostr.2128s0172 B. stricta v1.2
Defline:  (1 of 1) PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Genomic Order:  172
Name:  ? Bostr.2128s0172 Secondary Identifier:  ? PAC:30659104
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2128s0172 0.5kb upstream 0.5kb upstream 7742 true Scaffold2128: 754123-761864 Boechera stricta
Bostr.2128s0172 0.5kb upstream 0.5kb upstream 500 false Scaffold2128: 754123-754622 Boechera stricta
Bostr.2128s0172 0.5kb downstream 0.5kb downstream 7742 true Scaffold2128: 754623-762364 Boechera stricta
Bostr.2128s0172 0.5kb downstream 0.5kb downstream 500 false Scaffold2128: 761865-762364 Boechera stricta
Bostr.2128s0172 1.0kb upstream 1.0kb upstream 8242 true Scaffold2128: 753623-761864 Boechera stricta
Bostr.2128s0172 1.0kb upstream 1.0kb upstream 1000 false Scaffold2128: 753623-754622 Boechera stricta
Bostr.2128s0172 1.0kb downstream 1.0kb downstream 8242 true Scaffold2128: 754623-762864 Boechera stricta
Bostr.2128s0172 1.0kb downstream 1.0kb downstream 1000 false Scaffold2128: 761865-762864 Boechera stricta
Bostr.2128s0172 2.0kb upstream 2.0kb upstream 9242 true Scaffold2128: 752623-761864 Boechera stricta
Bostr.2128s0172 2.0kb upstream 2.0kb upstream 2000 false Scaffold2128: 752623-754622 Boechera stricta
Bostr.2128s0172 2.0kb downstream 2.0kb downstream 9242 true Scaffold2128: 754623-763864 Boechera stricta
Bostr.2128s0172 2.0kb downstream 2.0kb downstream 2000 false Scaffold2128: 761865-763864 Boechera stricta
Bostr.2128s0172 5.0kb upstream 5.0kb upstream 12242 true Scaffold2128: 749623-761864 Boechera stricta
Bostr.2128s0172 5.0kb upstream 5.0kb upstream 5000 false Scaffold2128: 749623-754622 Boechera stricta
Bostr.2128s0172 5.0kb downstream 5.0kb downstream 12242 true Scaffold2128: 754623-766864 Boechera stricta
Bostr.2128s0172 5.0kb downstream 5.0kb downstream 5000 false Scaffold2128: 761865-766864 Boechera stricta
Bostr.2128s0172 10.0kb upstream 10.0kb upstream 17242 true Scaffold2128: 744623-761864 Boechera stricta
Bostr.2128s0172 10.0kb upstream 10.0kb upstream 10000 false Scaffold2128: 744623-754622 Boechera stricta
Bostr.2128s0172 10.0kb downstream 10.0kb downstream 17242 true Scaffold2128: 754623-771864 Boechera stricta
Bostr.2128s0172 10.0kb downstream 10.0kb downstream 10000 false Scaffold2128: 761865-771864 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377771 5261 Brassicaceae View MSA
123828199 5264 Brassicales-Malvales View MSA
124340114 5266 SBM View MSA
124240618 5268 Malvidae View MSA
124066546 5270 Rosid View MSA
123736938 5271 Pentapetalae View MSA
122796953 5272 Eudicot View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain