Gene : Bostr.2199s0021 B. stricta v1.2
Defline:  (1 of 6) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  21
Name:  ? Bostr.2199s0021 Secondary Identifier:  ? PAC:30657020
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2199s0021 0.5kb upstream 0.5kb upstream 1931 true Scaffold2199: 303307-305237 Boechera stricta
Bostr.2199s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold2199: 304738-305237 Boechera stricta
Bostr.2199s0021 0.5kb downstream 0.5kb downstream 1931 true Scaffold2199: 302807-304737 Boechera stricta
Bostr.2199s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold2199: 302807-303306 Boechera stricta
Bostr.2199s0021 1.0kb upstream 1.0kb upstream 2431 true Scaffold2199: 303307-305737 Boechera stricta
Bostr.2199s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold2199: 304738-305737 Boechera stricta
Bostr.2199s0021 1.0kb downstream 1.0kb downstream 2431 true Scaffold2199: 302307-304737 Boechera stricta
Bostr.2199s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold2199: 302307-303306 Boechera stricta
Bostr.2199s0021 2.0kb upstream 2.0kb upstream 3431 true Scaffold2199: 303307-306737 Boechera stricta
Bostr.2199s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold2199: 304738-306737 Boechera stricta
Bostr.2199s0021 2.0kb downstream 2.0kb downstream 3431 true Scaffold2199: 301307-304737 Boechera stricta
Bostr.2199s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold2199: 301307-303306 Boechera stricta
Bostr.2199s0021 5.0kb upstream 5.0kb upstream 6431 true Scaffold2199: 303307-309737 Boechera stricta
Bostr.2199s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold2199: 304738-309737 Boechera stricta
Bostr.2199s0021 5.0kb downstream 5.0kb downstream 6431 true Scaffold2199: 298307-304737 Boechera stricta
Bostr.2199s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold2199: 298307-303306 Boechera stricta
Bostr.2199s0021 10.0kb upstream 10.0kb upstream 11431 true Scaffold2199: 303307-314737 Boechera stricta
Bostr.2199s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold2199: 304738-314737 Boechera stricta
Bostr.2199s0021 10.0kb downstream 10.0kb downstream 11431 true Scaffold2199: 293307-304737 Boechera stricta
Bostr.2199s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold2199: 293307-303306 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364902 5261 Brassicaceae View MSA
123798858 5264 Brassicales-Malvales View MSA
124296441 5266 SBM View MSA
124148595 5268 Malvidae View MSA
123874558 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain