Gene : Bostr.2128s0003 B. stricta v1.2
Defline:  (1 of 1) PTHR10044:SF127 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  3
Name:  ? Bostr.2128s0003 Secondary Identifier:  ? PAC:30659152
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2128s0003 0.5kb upstream 0.5kb upstream 6135 true Scaffold2128: 19073-25207 Boechera stricta
Bostr.2128s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2128: 24708-25207 Boechera stricta
Bostr.2128s0003 0.5kb downstream 0.5kb downstream 6135 true Scaffold2128: 18573-24707 Boechera stricta
Bostr.2128s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2128: 18573-19072 Boechera stricta
Bostr.2128s0003 1.0kb upstream 1.0kb upstream 6635 true Scaffold2128: 19073-25707 Boechera stricta
Bostr.2128s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2128: 24708-25707 Boechera stricta
Bostr.2128s0003 1.0kb downstream 1.0kb downstream 6635 true Scaffold2128: 18073-24707 Boechera stricta
Bostr.2128s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2128: 18073-19072 Boechera stricta
Bostr.2128s0003 2.0kb upstream 2.0kb upstream 7635 true Scaffold2128: 19073-26707 Boechera stricta
Bostr.2128s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2128: 24708-26707 Boechera stricta
Bostr.2128s0003 2.0kb downstream 2.0kb downstream 7635 true Scaffold2128: 17073-24707 Boechera stricta
Bostr.2128s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2128: 17073-19072 Boechera stricta
Bostr.2128s0003 5.0kb upstream 5.0kb upstream 10635 true Scaffold2128: 19073-29707 Boechera stricta
Bostr.2128s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2128: 24708-29707 Boechera stricta
Bostr.2128s0003 5.0kb downstream 5.0kb downstream 10635 true Scaffold2128: 14073-24707 Boechera stricta
Bostr.2128s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2128: 14073-19072 Boechera stricta
Bostr.2128s0003 10.0kb upstream 10.0kb upstream 15635 true Scaffold2128: 19073-34707 Boechera stricta
Bostr.2128s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2128: 24708-34707 Boechera stricta
Bostr.2128s0003 10.0kb downstream 10.0kb downstream 15635 true Scaffold2128: 9073-24707 Boechera stricta
Bostr.2128s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2128: 9073-19072 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367196 5261 Brassicaceae View MSA
123838809 5264 Brassicales-Malvales View MSA
124338275 5266 SBM View MSA
124245236 5268 Malvidae View MSA
124065463 5270 Rosid View MSA
123737422 5271 Pentapetalae View MSA
122787073 5272 Eudicot View MSA
122041881 5273 Angiosperm View MSA
121350906 5274 Embryophyte View MSA
123381933 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain