Gene : Bostr.2021s0010 B. stricta v1.2
Defline:  (1 of 1) PTHR31742:SF1 - RPA-INTERACTING PROTEIN Genomic Order:  10
Name:  ? Bostr.2021s0010 Secondary Identifier:  ? PAC:30676011
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2021s0010 0.5kb upstream 0.5kb upstream 2097 true Scaffold2021: 134385-136481 Boechera stricta
Bostr.2021s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2021: 134385-134884 Boechera stricta
Bostr.2021s0010 0.5kb downstream 0.5kb downstream 2097 true Scaffold2021: 134885-136981 Boechera stricta
Bostr.2021s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2021: 136482-136981 Boechera stricta
Bostr.2021s0010 1.0kb upstream 1.0kb upstream 2597 true Scaffold2021: 133885-136481 Boechera stricta
Bostr.2021s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2021: 133885-134884 Boechera stricta
Bostr.2021s0010 1.0kb downstream 1.0kb downstream 2597 true Scaffold2021: 134885-137481 Boechera stricta
Bostr.2021s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2021: 136482-137481 Boechera stricta
Bostr.2021s0010 2.0kb upstream 2.0kb upstream 3597 true Scaffold2021: 132885-136481 Boechera stricta
Bostr.2021s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2021: 132885-134884 Boechera stricta
Bostr.2021s0010 2.0kb downstream 2.0kb downstream 3597 true Scaffold2021: 134885-138481 Boechera stricta
Bostr.2021s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2021: 136482-138481 Boechera stricta
Bostr.2021s0010 5.0kb upstream 5.0kb upstream 6597 true Scaffold2021: 129885-136481 Boechera stricta
Bostr.2021s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2021: 129885-134884 Boechera stricta
Bostr.2021s0010 5.0kb downstream 5.0kb downstream 6597 true Scaffold2021: 134885-141481 Boechera stricta
Bostr.2021s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2021: 136482-141481 Boechera stricta
Bostr.2021s0010 10.0kb upstream 10.0kb upstream 11597 true Scaffold2021: 124885-136481 Boechera stricta
Bostr.2021s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2021: 124885-134884 Boechera stricta
Bostr.2021s0010 10.0kb downstream 10.0kb downstream 11597 true Scaffold2021: 134885-146481 Boechera stricta
Bostr.2021s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2021: 136482-146481 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369563 5261 Brassicaceae View MSA
123829444 5264 Brassicales-Malvales View MSA
124341150 5266 SBM View MSA
124237734 5268 Malvidae View MSA
124061489 5270 Rosid View MSA
123739858 5271 Pentapetalae View MSA
122789905 5272 Eudicot View MSA
122044802 5273 Angiosperm View MSA
121346952 5274 Embryophyte View MSA
123424751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain