Gene : Bostr.2021s0015 B. stricta v1.2
Defline:  (1 of 1) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  15
Name:  ? Bostr.2021s0015 Secondary Identifier:  ? PAC:30676010
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PHOTOALL-PWY Boechera stricta pathologic  
Bstricta PWY-101 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2021s0015 0.5kb upstream 0.5kb upstream 1877 true Scaffold2021: 237584-239460 Boechera stricta
Bostr.2021s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold2021: 237584-238083 Boechera stricta
Bostr.2021s0015 0.5kb downstream 0.5kb downstream 1877 true Scaffold2021: 238084-239960 Boechera stricta
Bostr.2021s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold2021: 239461-239960 Boechera stricta
Bostr.2021s0015 1.0kb upstream 1.0kb upstream 2377 true Scaffold2021: 237084-239460 Boechera stricta
Bostr.2021s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold2021: 237084-238083 Boechera stricta
Bostr.2021s0015 1.0kb downstream 1.0kb downstream 2377 true Scaffold2021: 238084-240460 Boechera stricta
Bostr.2021s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold2021: 239461-240460 Boechera stricta
Bostr.2021s0015 2.0kb upstream 2.0kb upstream 3377 true Scaffold2021: 236084-239460 Boechera stricta
Bostr.2021s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold2021: 236084-238083 Boechera stricta
Bostr.2021s0015 2.0kb downstream 2.0kb downstream 3377 true Scaffold2021: 238084-241460 Boechera stricta
Bostr.2021s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold2021: 239461-241460 Boechera stricta
Bostr.2021s0015 5.0kb upstream 5.0kb upstream 6377 true Scaffold2021: 233084-239460 Boechera stricta
Bostr.2021s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold2021: 233084-238083 Boechera stricta
Bostr.2021s0015 5.0kb downstream 5.0kb downstream 6377 true Scaffold2021: 238084-244460 Boechera stricta
Bostr.2021s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold2021: 239461-244460 Boechera stricta
Bostr.2021s0015 10.0kb upstream 10.0kb upstream 11377 true Scaffold2021: 228084-239460 Boechera stricta
Bostr.2021s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold2021: 228084-238083 Boechera stricta
Bostr.2021s0015 10.0kb downstream 10.0kb downstream 11377 true Scaffold2021: 238084-249460 Boechera stricta
Bostr.2021s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold2021: 239461-249460 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
122378869 5261 Brassicaceae View MSA
123838077 5264 Brassicales-Malvales View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain