Gene : Bostr.1460s0161 B. stricta v1.2
Defline:  (1 of 2) 4.1.1.18 - Lysine decarboxylase / L-lysine carboxy-lyase Genomic Order:  161
Name:  ? Bostr.1460s0161 Secondary Identifier:  ? PAC:30654570
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ARGSPECAT-PWY Boechera stricta pathologic  
Bstricta BSUBPOLYAMSYN-PWY Boechera stricta pathologic  
Bstricta PWY-7528 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1460s0161 0.5kb upstream 0.5kb upstream 2963 true Scaffold1460: 661642-664604 Boechera stricta
Bostr.1460s0161 0.5kb upstream 0.5kb upstream 500 false Scaffold1460: 661642-662141 Boechera stricta
Bostr.1460s0161 0.5kb downstream 0.5kb downstream 2963 true Scaffold1460: 662142-665104 Boechera stricta
Bostr.1460s0161 0.5kb downstream 0.5kb downstream 500 false Scaffold1460: 664605-665104 Boechera stricta
Bostr.1460s0161 1.0kb upstream 1.0kb upstream 3463 true Scaffold1460: 661142-664604 Boechera stricta
Bostr.1460s0161 1.0kb upstream 1.0kb upstream 1000 false Scaffold1460: 661142-662141 Boechera stricta
Bostr.1460s0161 1.0kb downstream 1.0kb downstream 3463 true Scaffold1460: 662142-665604 Boechera stricta
Bostr.1460s0161 1.0kb downstream 1.0kb downstream 1000 false Scaffold1460: 664605-665604 Boechera stricta
Bostr.1460s0161 2.0kb upstream 2.0kb upstream 4463 true Scaffold1460: 660142-664604 Boechera stricta
Bostr.1460s0161 2.0kb upstream 2.0kb upstream 2000 false Scaffold1460: 660142-662141 Boechera stricta
Bostr.1460s0161 2.0kb downstream 2.0kb downstream 4463 true Scaffold1460: 662142-666604 Boechera stricta
Bostr.1460s0161 2.0kb downstream 2.0kb downstream 2000 false Scaffold1460: 664605-666604 Boechera stricta
Bostr.1460s0161 5.0kb upstream 5.0kb upstream 7463 true Scaffold1460: 657142-664604 Boechera stricta
Bostr.1460s0161 5.0kb upstream 5.0kb upstream 5000 false Scaffold1460: 657142-662141 Boechera stricta
Bostr.1460s0161 5.0kb downstream 5.0kb downstream 7463 true Scaffold1460: 662142-669604 Boechera stricta
Bostr.1460s0161 5.0kb downstream 5.0kb downstream 5000 false Scaffold1460: 664605-669604 Boechera stricta
Bostr.1460s0161 10.0kb upstream 10.0kb upstream 12463 true Scaffold1460: 652142-664604 Boechera stricta
Bostr.1460s0161 10.0kb upstream 10.0kb upstream 10000 false Scaffold1460: 652142-662141 Boechera stricta
Bostr.1460s0161 10.0kb downstream 10.0kb downstream 12463 true Scaffold1460: 662142-674604 Boechera stricta
Bostr.1460s0161 10.0kb downstream 10.0kb downstream 10000 false Scaffold1460: 664605-674604 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365242 5261 Brassicaceae View MSA
123841428 5264 Brassicales-Malvales View MSA
124346938 5266 SBM View MSA
124250445 5268 Malvidae View MSA
124073000 5270 Rosid View MSA
123746333 5271 Pentapetalae View MSA
122785858 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain