Gene : Bostr.6251s0114 B. stricta v1.2
Defline:  (1 of 2) PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Genomic Order:  114
Name:  ? Bostr.6251s0114 Secondary Identifier:  ? PAC:30665578
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6251s0114 0.5kb upstream 0.5kb upstream 3680 true Scaffold6251: 555802-559481 Boechera stricta
Bostr.6251s0114 0.5kb upstream 0.5kb upstream 500 false Scaffold6251: 558982-559481 Boechera stricta
Bostr.6251s0114 0.5kb downstream 0.5kb downstream 3680 true Scaffold6251: 555302-558981 Boechera stricta
Bostr.6251s0114 0.5kb downstream 0.5kb downstream 500 false Scaffold6251: 555302-555801 Boechera stricta
Bostr.6251s0114 1.0kb upstream 1.0kb upstream 4180 true Scaffold6251: 555802-559981 Boechera stricta
Bostr.6251s0114 1.0kb upstream 1.0kb upstream 1000 false Scaffold6251: 558982-559981 Boechera stricta
Bostr.6251s0114 1.0kb downstream 1.0kb downstream 4180 true Scaffold6251: 554802-558981 Boechera stricta
Bostr.6251s0114 1.0kb downstream 1.0kb downstream 1000 false Scaffold6251: 554802-555801 Boechera stricta
Bostr.6251s0114 2.0kb upstream 2.0kb upstream 5180 true Scaffold6251: 555802-560981 Boechera stricta
Bostr.6251s0114 2.0kb upstream 2.0kb upstream 2000 false Scaffold6251: 558982-560981 Boechera stricta
Bostr.6251s0114 2.0kb downstream 2.0kb downstream 5180 true Scaffold6251: 553802-558981 Boechera stricta
Bostr.6251s0114 2.0kb downstream 2.0kb downstream 2000 false Scaffold6251: 553802-555801 Boechera stricta
Bostr.6251s0114 5.0kb upstream 5.0kb upstream 8180 true Scaffold6251: 555802-563981 Boechera stricta
Bostr.6251s0114 5.0kb upstream 5.0kb upstream 5000 false Scaffold6251: 558982-563981 Boechera stricta
Bostr.6251s0114 5.0kb downstream 5.0kb downstream 8180 true Scaffold6251: 550802-558981 Boechera stricta
Bostr.6251s0114 5.0kb downstream 5.0kb downstream 5000 false Scaffold6251: 550802-555801 Boechera stricta
Bostr.6251s0114 10.0kb upstream 10.0kb upstream 13180 true Scaffold6251: 555802-568981 Boechera stricta
Bostr.6251s0114 10.0kb upstream 10.0kb upstream 10000 false Scaffold6251: 558982-568981 Boechera stricta
Bostr.6251s0114 10.0kb downstream 10.0kb downstream 13180 true Scaffold6251: 545802-558981 Boechera stricta
Bostr.6251s0114 10.0kb downstream 10.0kb downstream 10000 false Scaffold6251: 545802-555801 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792833 5272 Eudicot View MSA
122372964 5261 Brassicaceae View MSA
123838874 5264 Brassicales-Malvales View MSA
124344193 5266 SBM View MSA
124250832 5268 Malvidae View MSA
124070780 5270 Rosid View MSA
123741557 5271 Pentapetalae View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain