Gene : Bostr.6053s0001 B. stricta v1.2
Defline:  (1 of 4) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  1
Name:  ? Bostr.6053s0001 Secondary Identifier:  ? PAC:30666309
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6053s0001 0.5kb upstream 0.5kb upstream 2725 true Scaffold6053: 1-2725 Boechera stricta
Bostr.6053s0001 0.5kb upstream 0.5kb upstream 88 false Scaffold6053: 1-88 Boechera stricta
Bostr.6053s0001 0.5kb downstream 0.5kb downstream 2654 true Scaffold6053: 89-2742 Boechera stricta
Bostr.6053s0001 0.5kb downstream 0.5kb downstream 17 false Scaffold6053: 2726-2742 Boechera stricta
Bostr.6053s0001 1.0kb upstream 1.0kb upstream 2725 true Scaffold6053: 1-2725 Boechera stricta
Bostr.6053s0001 1.0kb upstream 1.0kb upstream 88 false Scaffold6053: 1-88 Boechera stricta
Bostr.6053s0001 1.0kb downstream 1.0kb downstream 2654 true Scaffold6053: 89-2742 Boechera stricta
Bostr.6053s0001 1.0kb downstream 1.0kb downstream 17 false Scaffold6053: 2726-2742 Boechera stricta
Bostr.6053s0001 2.0kb upstream 2.0kb upstream 2725 true Scaffold6053: 1-2725 Boechera stricta
Bostr.6053s0001 2.0kb upstream 2.0kb upstream 88 false Scaffold6053: 1-88 Boechera stricta
Bostr.6053s0001 2.0kb downstream 2.0kb downstream 2654 true Scaffold6053: 89-2742 Boechera stricta
Bostr.6053s0001 2.0kb downstream 2.0kb downstream 17 false Scaffold6053: 2726-2742 Boechera stricta
Bostr.6053s0001 5.0kb upstream 5.0kb upstream 2725 true Scaffold6053: 1-2725 Boechera stricta
Bostr.6053s0001 5.0kb upstream 5.0kb upstream 88 false Scaffold6053: 1-88 Boechera stricta
Bostr.6053s0001 5.0kb downstream 5.0kb downstream 2654 true Scaffold6053: 89-2742 Boechera stricta
Bostr.6053s0001 5.0kb downstream 5.0kb downstream 17 false Scaffold6053: 2726-2742 Boechera stricta
Bostr.6053s0001 10.0kb upstream 10.0kb upstream 2725 true Scaffold6053: 1-2725 Boechera stricta
Bostr.6053s0001 10.0kb upstream 10.0kb upstream 88 false Scaffold6053: 1-88 Boechera stricta
Bostr.6053s0001 10.0kb downstream 10.0kb downstream 2654 true Scaffold6053: 89-2742 Boechera stricta
Bostr.6053s0001 10.0kb downstream 10.0kb downstream 17 false Scaffold6053: 2726-2742 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368592 5261 Brassicaceae View MSA
123840643 5264 Brassicales-Malvales View MSA
124345424 5266 SBM View MSA
124237184 5268 Malvidae View MSA
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain