Gene : Bostr.2570s0226 B. stricta v1.2

Defline:  (1 of 1) PF00187//PF00967 - Chitin recognition protein (Chitin_bind_1) // Barwin family (Barwin) Genomic Order:  226
Name:  ? Bostr.2570s0226 Secondary Identifier:  ? PAC:30666651

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.2570s0226 0.5kb upstream 0.5kb upstream 2029 true Scaffold2570: 1132030-1134058 Boechera stricta
Bostr.2570s0226 0.5kb upstream 0.5kb upstream 500 false Scaffold2570: 1132030-1132529 Boechera stricta
Bostr.2570s0226 0.5kb downstream 0.5kb downstream 2029 true Scaffold2570: 1132530-1134558 Boechera stricta
Bostr.2570s0226 0.5kb downstream 0.5kb downstream 500 false Scaffold2570: 1134059-1134558 Boechera stricta
Bostr.2570s0226 1.0kb upstream 1.0kb upstream 2529 true Scaffold2570: 1131530-1134058 Boechera stricta
Bostr.2570s0226 1.0kb upstream 1.0kb upstream 1000 false Scaffold2570: 1131530-1132529 Boechera stricta
Bostr.2570s0226 1.0kb downstream 1.0kb downstream 2529 true Scaffold2570: 1132530-1135058 Boechera stricta
Bostr.2570s0226 1.0kb downstream 1.0kb downstream 1000 false Scaffold2570: 1134059-1135058 Boechera stricta
Bostr.2570s0226 2.0kb upstream 2.0kb upstream 3529 true Scaffold2570: 1130530-1134058 Boechera stricta
Bostr.2570s0226 2.0kb upstream 2.0kb upstream 2000 false Scaffold2570: 1130530-1132529 Boechera stricta
Bostr.2570s0226 2.0kb downstream 2.0kb downstream 3529 true Scaffold2570: 1132530-1136058 Boechera stricta
Bostr.2570s0226 2.0kb downstream 2.0kb downstream 2000 false Scaffold2570: 1134059-1136058 Boechera stricta
Bostr.2570s0226 5.0kb upstream 5.0kb upstream 6529 true Scaffold2570: 1127530-1134058 Boechera stricta
Bostr.2570s0226 5.0kb upstream 5.0kb upstream 5000 false Scaffold2570: 1127530-1132529 Boechera stricta
Bostr.2570s0226 5.0kb downstream 5.0kb downstream 6529 true Scaffold2570: 1132530-1139058 Boechera stricta
Bostr.2570s0226 5.0kb downstream 5.0kb downstream 5000 false Scaffold2570: 1134059-1139058 Boechera stricta
Bostr.2570s0226 10.0kb upstream 10.0kb upstream 11529 true Scaffold2570: 1122530-1134058 Boechera stricta
Bostr.2570s0226 10.0kb upstream 10.0kb upstream 10000 false Scaffold2570: 1122530-1132529 Boechera stricta
Bostr.2570s0226 10.0kb downstream 10.0kb downstream 11529 true Scaffold2570: 1132530-1144058 Boechera stricta
Bostr.2570s0226 10.0kb downstream 10.0kb downstream 10000 false Scaffold2570: 1134059-1144058 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375037 5261 Brassicaceae View MSA
123828440 5264 Brassicales-Malvales View MSA
124343100 5266 SBM View MSA
124249005 5268 Malvidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain