Gene : Bostr.6769s0004 B. stricta v1.2
Defline:  (1 of 1) PTHR23315:SF88 - ARM REPEAT PROTEIN Genomic Order:  4
Name:  ? Bostr.6769s0004 Secondary Identifier:  ? PAC:30662707
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6769s0004 0.5kb upstream 0.5kb upstream 2758 true Scaffold6769: 47793-50550 Boechera stricta
Bostr.6769s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6769: 50051-50550 Boechera stricta
Bostr.6769s0004 0.5kb downstream 0.5kb downstream 2758 true Scaffold6769: 47293-50050 Boechera stricta
Bostr.6769s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6769: 47293-47792 Boechera stricta
Bostr.6769s0004 1.0kb upstream 1.0kb upstream 3258 true Scaffold6769: 47793-51050 Boechera stricta
Bostr.6769s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6769: 50051-51050 Boechera stricta
Bostr.6769s0004 1.0kb downstream 1.0kb downstream 3258 true Scaffold6769: 46793-50050 Boechera stricta
Bostr.6769s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6769: 46793-47792 Boechera stricta
Bostr.6769s0004 2.0kb upstream 2.0kb upstream 4258 true Scaffold6769: 47793-52050 Boechera stricta
Bostr.6769s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold6769: 50051-52050 Boechera stricta
Bostr.6769s0004 2.0kb downstream 2.0kb downstream 4258 true Scaffold6769: 45793-50050 Boechera stricta
Bostr.6769s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6769: 45793-47792 Boechera stricta
Bostr.6769s0004 5.0kb upstream 5.0kb upstream 7258 true Scaffold6769: 47793-55050 Boechera stricta
Bostr.6769s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold6769: 50051-55050 Boechera stricta
Bostr.6769s0004 5.0kb downstream 5.0kb downstream 7258 true Scaffold6769: 42793-50050 Boechera stricta
Bostr.6769s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6769: 42793-47792 Boechera stricta
Bostr.6769s0004 10.0kb upstream 10.0kb upstream 12258 true Scaffold6769: 47793-60050 Boechera stricta
Bostr.6769s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold6769: 50051-60050 Boechera stricta
Bostr.6769s0004 10.0kb downstream 10.0kb downstream 12258 true Scaffold6769: 37793-50050 Boechera stricta
Bostr.6769s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6769: 37793-47792 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343344 5261 Brassicaceae View MSA
123833869 5264 Brassicales-Malvales View MSA
124338499 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain