Gene : Bostr.6773s0007 B. stricta v1.2
Defline:  (1 of 21) KOG0417 - Ubiquitin-protein ligase Genomic Order:  7
Name:  ? Bostr.6773s0007 Secondary Identifier:  ? PAC:30676153
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6773s0007 0.5kb upstream 0.5kb upstream 1424 true Scaffold6773: 139829-141252 Boechera stricta
Bostr.6773s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold6773: 140753-141252 Boechera stricta
Bostr.6773s0007 0.5kb downstream 0.5kb downstream 1424 true Scaffold6773: 139329-140752 Boechera stricta
Bostr.6773s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold6773: 139329-139828 Boechera stricta
Bostr.6773s0007 1.0kb upstream 1.0kb upstream 1924 true Scaffold6773: 139829-141752 Boechera stricta
Bostr.6773s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold6773: 140753-141752 Boechera stricta
Bostr.6773s0007 1.0kb downstream 1.0kb downstream 1924 true Scaffold6773: 138829-140752 Boechera stricta
Bostr.6773s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold6773: 138829-139828 Boechera stricta
Bostr.6773s0007 2.0kb upstream 2.0kb upstream 2924 true Scaffold6773: 139829-142752 Boechera stricta
Bostr.6773s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold6773: 140753-142752 Boechera stricta
Bostr.6773s0007 2.0kb downstream 2.0kb downstream 2924 true Scaffold6773: 137829-140752 Boechera stricta
Bostr.6773s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold6773: 137829-139828 Boechera stricta
Bostr.6773s0007 5.0kb upstream 5.0kb upstream 5924 true Scaffold6773: 139829-145752 Boechera stricta
Bostr.6773s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold6773: 140753-145752 Boechera stricta
Bostr.6773s0007 5.0kb downstream 5.0kb downstream 5924 true Scaffold6773: 134829-140752 Boechera stricta
Bostr.6773s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold6773: 134829-139828 Boechera stricta
Bostr.6773s0007 10.0kb upstream 10.0kb upstream 10924 true Scaffold6773: 139829-150752 Boechera stricta
Bostr.6773s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold6773: 140753-150752 Boechera stricta
Bostr.6773s0007 10.0kb downstream 10.0kb downstream 10924 true Scaffold6773: 129829-140752 Boechera stricta
Bostr.6773s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold6773: 129829-139828 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361845 5261 Brassicaceae View MSA
123798259 5264 Brassicales-Malvales View MSA
124295926 5266 SBM View MSA
124254787 5268 Malvidae View MSA
124074953 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain