Gene : Bostr.6570s0002 B. stricta v1.2
Defline:  (1 of 2) PTHR11183:SF33 - GALACTINOL SYNTHASE 1-RELATED Genomic Order:  2
Name:  ? Bostr.6570s0002 Secondary Identifier:  ? PAC:30655664
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5337 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6570s0002 0.5kb upstream 0.5kb upstream 10328 true Scaffold6570: 47297-57624 Boechera stricta
Bostr.6570s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold6570: 47297-47796 Boechera stricta
Bostr.6570s0002 0.5kb downstream 0.5kb downstream 10328 true Scaffold6570: 47797-58124 Boechera stricta
Bostr.6570s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold6570: 57625-58124 Boechera stricta
Bostr.6570s0002 1.0kb upstream 1.0kb upstream 10828 true Scaffold6570: 46797-57624 Boechera stricta
Bostr.6570s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold6570: 46797-47796 Boechera stricta
Bostr.6570s0002 1.0kb downstream 1.0kb downstream 10828 true Scaffold6570: 47797-58624 Boechera stricta
Bostr.6570s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold6570: 57625-58624 Boechera stricta
Bostr.6570s0002 2.0kb upstream 2.0kb upstream 11828 true Scaffold6570: 45797-57624 Boechera stricta
Bostr.6570s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold6570: 45797-47796 Boechera stricta
Bostr.6570s0002 2.0kb downstream 2.0kb downstream 11828 true Scaffold6570: 47797-59624 Boechera stricta
Bostr.6570s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold6570: 57625-59624 Boechera stricta
Bostr.6570s0002 5.0kb upstream 5.0kb upstream 14828 true Scaffold6570: 42797-57624 Boechera stricta
Bostr.6570s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold6570: 42797-47796 Boechera stricta
Bostr.6570s0002 5.0kb downstream 5.0kb downstream 14828 true Scaffold6570: 47797-62624 Boechera stricta
Bostr.6570s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold6570: 57625-62624 Boechera stricta
Bostr.6570s0002 10.0kb upstream 10.0kb upstream 19828 true Scaffold6570: 37797-57624 Boechera stricta
Bostr.6570s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold6570: 37797-47796 Boechera stricta
Bostr.6570s0002 10.0kb downstream 10.0kb downstream 18839 true Scaffold6570: 47797-66635 Boechera stricta
Bostr.6570s0002 10.0kb downstream 10.0kb downstream 9011 false Scaffold6570: 57625-66635 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376753 5261 Brassicaceae View MSA
123842385 5264 Brassicales-Malvales View MSA
124323451 5266 SBM View MSA
124256963 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain