Gene : Bostr.6864s0212 B. stricta v1.2

Defline:  (1 of 1) PTHR12565//PTHR12565:SF118 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  212
Name:  ? Bostr.6864s0212 Secondary Identifier:  ? PAC:30672491

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.6864s0212 0.5kb upstream 0.5kb upstream 1650 true Scaffold6864: 1028441-1030090 Boechera stricta
Bostr.6864s0212 0.5kb upstream 0.5kb upstream 500 false Scaffold6864: 1028441-1028940 Boechera stricta
Bostr.6864s0212 0.5kb downstream 0.5kb downstream 1650 true Scaffold6864: 1028941-1030590 Boechera stricta
Bostr.6864s0212 0.5kb downstream 0.5kb downstream 500 false Scaffold6864: 1030091-1030590 Boechera stricta
Bostr.6864s0212 1.0kb upstream 1.0kb upstream 2150 true Scaffold6864: 1027941-1030090 Boechera stricta
Bostr.6864s0212 1.0kb upstream 1.0kb upstream 1000 false Scaffold6864: 1027941-1028940 Boechera stricta
Bostr.6864s0212 1.0kb downstream 1.0kb downstream 2150 true Scaffold6864: 1028941-1031090 Boechera stricta
Bostr.6864s0212 1.0kb downstream 1.0kb downstream 1000 false Scaffold6864: 1030091-1031090 Boechera stricta
Bostr.6864s0212 2.0kb upstream 2.0kb upstream 3150 true Scaffold6864: 1026941-1030090 Boechera stricta
Bostr.6864s0212 2.0kb upstream 2.0kb upstream 2000 false Scaffold6864: 1026941-1028940 Boechera stricta
Bostr.6864s0212 2.0kb downstream 2.0kb downstream 3150 true Scaffold6864: 1028941-1032090 Boechera stricta
Bostr.6864s0212 2.0kb downstream 2.0kb downstream 2000 false Scaffold6864: 1030091-1032090 Boechera stricta
Bostr.6864s0212 5.0kb upstream 5.0kb upstream 6150 true Scaffold6864: 1023941-1030090 Boechera stricta
Bostr.6864s0212 5.0kb upstream 5.0kb upstream 5000 false Scaffold6864: 1023941-1028940 Boechera stricta
Bostr.6864s0212 5.0kb downstream 5.0kb downstream 6150 true Scaffold6864: 1028941-1035090 Boechera stricta
Bostr.6864s0212 5.0kb downstream 5.0kb downstream 5000 false Scaffold6864: 1030091-1035090 Boechera stricta
Bostr.6864s0212 10.0kb upstream 10.0kb upstream 11150 true Scaffold6864: 1018941-1030090 Boechera stricta
Bostr.6864s0212 10.0kb upstream 10.0kb upstream 10000 false Scaffold6864: 1018941-1028940 Boechera stricta
Bostr.6864s0212 10.0kb downstream 10.0kb downstream 11150 true Scaffold6864: 1028941-1040090 Boechera stricta
Bostr.6864s0212 10.0kb downstream 10.0kb downstream 10000 false Scaffold6864: 1030091-1040090 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360554 5261 Brassicaceae View MSA
123837736 5264 Brassicales-Malvales View MSA
124350383 5266 SBM View MSA
124250607 5268 Malvidae View MSA
124070327 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain